RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
CX3CL1-201ENST00000006053 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
CX3CL1-201ENST00000006053 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
CX3CL1-201ENST00000006053 PKNOX2Q96KN3 472 aa13.98□□□□□ -0.17
CX3CL1-201ENST00000006053 RGL3Q3MIN7 710 aa13.97□□□□□ -0.17
CX3CL1-201ENST00000006053 UHRF1BP1Q6BDS2 1440 aa13.97□□□□□ -0.17
CX3CL1-201ENST00000006053 PLEKHD1A6NEE1 506 aa13.97□□□□□ -0.17
CX3CL1-201ENST00000006053 CDCA7LQ96GN5 454 aa13.97□□□□□ -0.17
CX3CL1-201ENST00000006053 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
CX3CL1-201ENST00000006053 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
CX3CL1-201ENST00000006053 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.17
CX3CL1-201ENST00000006053 PDE4AP27815 886 aa13.96□□□□□ -0.17
CX3CL1-201ENST00000006053 NLRP13Q86W25 1043 aa13.96□□□□□ -0.17
CX3CL1-201ENST00000006053 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
CX3CL1-201ENST00000006053 PLIN1O60240 522 aa13.96□□□□□ -0.18
CX3CL1-201ENST00000006053 HNRNPMP52272 730 aaKnown RBP eCLIP13.95□□□□□ -0.18
CX3CL1-201ENST00000006053 CC2D1BQ5T0F9 858 aaKnown RBP13.95□□□□□ -0.18
CX3CL1-201ENST00000006053 PODXL2Q9NZ53 605 aa13.95□□□□□ -0.18
CX3CL1-201ENST00000006053 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
CX3CL1-201ENST00000006053 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
CX3CL1-201ENST00000006053 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
CX3CL1-201ENST00000006053 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
CX3CL1-201ENST00000006053 SKAP1Q86WV1 359 aa13.93□□□□□ -0.18
CX3CL1-201ENST00000006053 IFT140Q96RY7 1462 aa13.92□□□□□ -0.18
CX3CL1-201ENST00000006053 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
CX3CL1-201ENST00000006053 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
CX3CL1-201ENST00000006053 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
CX3CL1-201ENST00000006053 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
CX3CL1-201ENST00000006053 NEFMP07197 916 aa13.9□□□□□ -0.18
CX3CL1-201ENST00000006053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
CX3CL1-201ENST00000006053 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
CX3CL1-201ENST00000006053 CROCC2H7BZ55 1655 aa13.89□□□□□ -0.19
CX3CL1-201ENST00000006053 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
CX3CL1-201ENST00000006053 PARD3Q8TEW0 1356 aa13.89□□□□□ -0.19
CX3CL1-201ENST00000006053 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
CX3CL1-201ENST00000006053 PER1O15534 1290 aaPredicted RBP13.87□□□□□ -0.19
CX3CL1-201ENST00000006053 MS4A1P11836 297 aa13.87□□□□□ -0.19
CX3CL1-201ENST00000006053 PANK3Q9H999 370 aa13.87□□□□□ -0.19
CX3CL1-201ENST00000006053 CCDC144AA2RUR9 1427 aa13.85□□□□□ -0.19
CX3CL1-201ENST00000006053 ADCY10Q96PN6 1610 aa13.84□□□□□ -0.19
CX3CL1-201ENST00000006053 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
CX3CL1-201ENST00000006053 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
CX3CL1-201ENST00000006053 PRAG1Q86YV5 1406 aa13.83□□□□□ -0.19
CX3CL1-201ENST00000006053 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.2
CX3CL1-201ENST00000006053 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.2
CX3CL1-201ENST00000006053 C20orf194Q5TEA3 1177 aa13.83□□□□□ -0.2
CX3CL1-201ENST00000006053 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
CX3CL1-201ENST00000006053 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
CX3CL1-201ENST00000006053 ATP10BO94823 1461 aa13.82□□□□□ -0.2
CX3CL1-201ENST00000006053 ABCC10Q5T3U5 1492 aa13.82□□□□□ -0.2
CX3CL1-201ENST00000006053 E9PCH4 1651 aa13.82□□□□□ -0.2
CX3CL1-201ENST00000006053 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
CX3CL1-201ENST00000006053 PTPRGP23470 1445 aa13.81□□□□□ -0.2
CX3CL1-201ENST00000006053 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
CX3CL1-201ENST00000006053 SLC4A3P48751 1232 aa13.8□□□□□ -0.2
CX3CL1-201ENST00000006053 TMF1P82094 1093 aa13.8□□□□□ -0.2
CX3CL1-201ENST00000006053 TESK2Q96S53 571 aa13.8□□□□□ -0.2
CX3CL1-201ENST00000006053 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
CX3CL1-201ENST00000006053 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
CX3CL1-201ENST00000006053 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
CX3CL1-201ENST00000006053 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
CX3CL1-201ENST00000006053 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
CX3CL1-201ENST00000006053 WASHC2CQ9Y4E1 1318 aa13.78□□□□□ -0.2
CX3CL1-201ENST00000006053 WDR43Q15061 677 aaKnown RBP eCLIP13.78□□□□□ -0.2
CX3CL1-201ENST00000006053 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
CX3CL1-201ENST00000006053 COL17A1Q9UMD9 1497 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-201ENST00000006053 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-201ENST00000006053 TRPM1Q7Z4N2 1603 aa13.76□□□□□ -0.21
CX3CL1-201ENST00000006053 A2MP01023 1474 aa13.76□□□□□ -0.21
CX3CL1-201ENST00000006053 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
CX3CL1-201ENST00000006053 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
CX3CL1-201ENST00000006053 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
CX3CL1-201ENST00000006053 RGS3P49796 1198 aa13.74□□□□□ -0.21
CX3CL1-201ENST00000006053 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
CX3CL1-201ENST00000006053 ABCA8O94911 1581 aa13.74□□□□□ -0.21
CX3CL1-201ENST00000006053 RSPH4AQ5TD94 716 aa13.73□□□□□ -0.21
CX3CL1-201ENST00000006053 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
CX3CL1-201ENST00000006053 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
CX3CL1-201ENST00000006053 CENPQQ7L2Z9 268 aaPredicted RBP13.72□□□□□ -0.21
CX3CL1-201ENST00000006053 PLEKHH1Q9ULM0 1364 aa13.72□□□□□ -0.21
CX3CL1-201ENST00000006053 NUP160Q12769 1436 aa13.72□□□□□ -0.21
CX3CL1-201ENST00000006053 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
CX3CL1-201ENST00000006053 ARHGEF5Q12774 1597 aa13.71□□□□□ -0.21
CX3CL1-201ENST00000006053 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
CX3CL1-201ENST00000006053 CCDC146Q8IYE0 955 aa13.71□□□□□ -0.21
CX3CL1-201ENST00000006053 ZMYM4Q5VZL5 1548 aa13.71□□□□□ -0.21
CX3CL1-201ENST00000006053 KDM2BQ8NHM5 1336 aa13.71□□□□□ -0.21
CX3CL1-201ENST00000006053 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
CX3CL1-201ENST00000006053 SAMD9LQ8IVG5 1584 aa13.7□□□□□ -0.22
CX3CL1-201ENST00000006053 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
CX3CL1-201ENST00000006053 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
CX3CL1-201ENST00000006053 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-201ENST00000006053 INSRP06213 1382 aa13.69□□□□□ -0.22
CX3CL1-201ENST00000006053 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
CX3CL1-201ENST00000006053 GSE1Q14687 1217 aa13.68□□□□□ -0.22
CX3CL1-201ENST00000006053 C8orf34Q49A92 452 aa13.67□□□□□ -0.22
CX3CL1-201ENST00000006053 ARHGAP5Q13017 1502 aa13.67□□□□□ -0.22
CX3CL1-201ENST00000006053 BRPF3Q9ULD4 1205 aa13.67□□□□□ -0.22
CX3CL1-201ENST00000006053 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
CX3CL1-201ENST00000006053 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms