RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 GorabQ8BRM2 368 aa11.17□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Rabep1O35551 862 aa11.17□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Cdkn1cP49919 348 aa11.17□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Plppr3Q7TPB0 716 aa11.17□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Kif20aP97329 887 aa11.16□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Fez1Q8K0X8 392 aa11.16□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Kif16bB1AVY7 1312 aa11.16□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Tmf1B9EKI3 1091 aa11.16□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Tpm4Q6IRU2 248 aa11.16□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Ppm1eQ80TL0 749 aa11.15□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Ccar1Q8CH18 1146 aaKnown RBP11.15□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Cluap1Q8R3P7 413 aa11.15□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Golga2Q921M4 999 aa11.15□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Gcom1E9PZ54 550 aa11.14□□□□□ -0.63
Ptpre-204ENSMUST00000209979 MyzapQ3UIJ9 466 aa11.14□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Mtus2Q3UHD3 1353 aa11.14□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Gtf3c5Q8R2T8 520 aa11.14□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Hap1O35668 628 aa11.14□□□□□ -0.63
Ptpre-204ENSMUST00000209979 AppP12023 770 aa11.14□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Dixdc1Q80Y83 711 aa11.13□□□□□ -0.63
Ptpre-204ENSMUST00000209979 KinQ8K339 391 aa11.13□□□□□ -0.63
Ptpre-204ENSMUST00000209979 1700019A02RikA0A087WPV9 146 aa11.13□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Ercc6F8VPZ5 1481 aa11.13□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Drc7Q6V3W6 876 aa11.13□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Gabpb2P81069 414 aa11.12□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Hook1Q8BIL5 728 aa11.12□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Clstn1Q9EPL2 979 aa11.12□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Ccdc47Q9D024 483 aaKnown RBP11.11□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Hspa5P20029 655 aaKnown RBP11.11□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Stard8Q8K031 1019 aa11.11□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Rock2P70336 1388 aa11.11□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Rtf1A2AQ19 715 aaKnown RBP11.11□□□□□ -0.63
Ptpre-204ENSMUST00000209979 BbxQ8VBW5 907 aa11.1□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Ak7Q9D2H2 614 aa11.1□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Stag3O70576 1240 aa11.09□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Sycp1Q62209 993 aa11.09□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Rundc1Q0VDN7 615 aa11.09□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Evc2Q8K1G2 1220 aa11.09□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Tmco5bQ80X59 307 aa11.09□□□□□ -0.63
Ptpre-204ENSMUST00000209979 TimelessQ9R1X4 1197 aa11.09□□□□□ -0.63
Ptpre-204ENSMUST00000209979 Smg6P61406 1418 aaKnown RBP11.08□□□□□ -0.64
Ptpre-204ENSMUST00000209979 OptnQ8K3K8 584 aa11.08□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Atl3Q91YH5 541 aa11.08□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Ccdc83Q9D4V3 305 aa11.08□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Ubxn4Q8VCH8 506 aa11.08□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Nop14Q8R3N1 860 aaKnown RBP11.07□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Rbm10Q99KG3 930 aaKnown RBP11.07□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Eif2s2Q99L45 331 aaKnown RBP11.07□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Kif7B7ZNG0 1348 aa11.06□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Arhgap27A2AB59 869 aa11.06□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Cplx2P84086 134 aa11.06□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Noc3lQ8VI84 807 aaKnown RBP11.06□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Tmco3Q8BH01 678 aa11.06□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Rnf20Q5DTM8 973 aa11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Necab1Q8BG18 352 aa11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 U2af1Q9D883 239 aaKnown RBP11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 PdcQ9QW08 244 aa11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Bicd2Q921C5 820 aa11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Prkrip1Q9CWV6 186 aaKnown RBP11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Rrp7aQ9D1C9 280 aaKnown RBP11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Gm21969J3QJZ1 289 aa11.05□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Chmp4cQ9D7F7 232 aa11.04□□□□□ -0.64
Ptpre-204ENSMUST00000209979 DmtnQ9WV69 405 aa11.04□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Gprasp1Q5U4C1 1347 aa11.04□□□□□ -0.64
Ptpre-204ENSMUST00000209979 U2surpQ6NV83 1029 aaKnown RBP11.04□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Wdr78E9PYY5 807 aa11.04□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Arglu1Q3UL36 271 aaKnown RBP11.04□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Rfx1P48377 963 aa11.03□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Nol10Q5RJG1 687 aaKnown RBP11.03□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Brpf1B2RRD7 1212 aa11.03□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Pkd2O35245 966 aa11.03□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Rec8Q8C5S7 591 aa11.03□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Spag9Q58A65 1321 aaKnown RBP11.02□□□□□ -0.64
Ptpre-204ENSMUST00000209979 HmmrQ00547 794 aaKnown RBP11.02□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Ksr2Q3UVC0 959 aa11.02□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Fez2Q6TYB5 348 aa11.02□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Gpatch3Q8BIY1 525 aa11.02□□□□□ -0.64
Ptpre-204ENSMUST00000209979 Trap1aP19473 224 aa11.02□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Arid4aF8VPQ2 1261 aaKnown RBP11.02□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Q3TQI7 289 aaKnown RBP11.01□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Ccdc146E9Q9F7 977 aa11.01□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Gtf2e1Q9D0D5 440 aa11□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Cetn4Q8K4K1 168 aa11□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Smc3Q9CW03 1217 aaKnown RBP11□□□□□ -0.65
Ptpre-204ENSMUST00000209979 NcapgE9PWG6 1004 aa11□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Znf526Q8BI66 675 aa11□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Cchcr1Q8K2I2 770 aa11□□□□□ -0.65
Ptpre-204ENSMUST00000209979 CrbnQ8C7D2 445 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Nat10Q8K224 1024 aaKnown RBP10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Trim58Q5NCC9 485 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Paf1Q8K2T8 535 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Dusp27Q148W8 1138 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 1700010I14RikQ7TPG0 532 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Fyco1Q8VDC1 1437 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Ccdc183A2AJB1 534 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Cep112Q5PR68 954 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Sin3aQ60520 1274 aaKnown RBP10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Znf330Q922H9 316 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Baz1bQ9Z277 1479 aa10.99□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Odf2A3KGV1 830 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms