RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Slc24a1Q91WD8 1130 aa33.99■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 PnisrA2AJT4 805 aaKnown RBP33.98■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 NhsB1AV60 1647 aa33.98■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 Sart1Q9Z315 806 aaKnown RBP33.98■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 NrdcQ8BHG1 1161 aa33.97■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 Exoc6Q8R313 802 aa33.97■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 Hecw1Q8K4P8 1604 aa33.96■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 Wwc2Q6NXJ0 1187 aa33.96■■■■□ 3.03
Cldnd1-201ENSMUST00000023426 Calr4Q3TQS0 420 aa33.94■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Asxl1P59598 1514 aa33.94■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Iqgap1Q9JKF1 1657 aaKnown RBP33.93■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Cdk13Q69ZA1 1511 aaKnown RBP33.93■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Abcc3B2RX12 1523 aa33.92■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Prdm16A2A935 1275 aa33.91■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Grwd1Q810D6 446 aaKnown RBP33.91■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Abcc1O35379 1528 aa33.91■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Cd109Q8R422 1442 aa33.89■■■■□ 3.02
Cldnd1-201ENSMUST00000023426 Ppip5k1A2ARP1 1436 aa33.86■■■■□ 3.01
Cldnd1-201ENSMUST00000023426 Atp7aQ64430 1491 aa33.83■■■■□ 3.01
Cldnd1-201ENSMUST00000023426 Abca8bQ8K440 1620 aa33.83■■■■□ 3.01
Cldnd1-201ENSMUST00000023426 Chd1P40201 1711 aa33.83■■■■□ 3.01
Cldnd1-201ENSMUST00000023426 Hdac5Q9Z2V6 1113 aa33.8■■■■□ 3
Cldnd1-201ENSMUST00000023426 Washc2Q6PGL7 1334 aa33.79■■■■□ 3
Cldnd1-201ENSMUST00000023426 Atp10dQ8K2X1 1416 aa33.78■■■■□ 3
Cldnd1-201ENSMUST00000023426 Spag9Q58A65 1321 aaKnown RBP33.78■■■■□ 3
Cldnd1-201ENSMUST00000023426 AI481877A2ALV5 1481 aa33.76■■■■□ 3
Cldnd1-201ENSMUST00000023426 Anp32aO35381 247 aa33.76■■■■□ 3
Cldnd1-201ENSMUST00000023426 Cdc42bpbQ7TT50 1713 aa33.75■■■□□ 2.99
Cldnd1-201ENSMUST00000023426 Gapvd1Q6PAR5 1458 aa33.74■■■□□ 2.99
Cldnd1-201ENSMUST00000023426 Igf1rQ60751 1373 aa33.74■■■□□ 2.99
Cldnd1-201ENSMUST00000023426 Robo2Q7TPD3 1470 aa33.73■■■□□ 2.99
Cldnd1-201ENSMUST00000023426 Zbtb7cQ8VCZ7 619 aa33.71■■■□□ 2.99
Cldnd1-201ENSMUST00000023426 Tarbp1E9Q368 1579 aa33.7■■■□□ 2.99
Cldnd1-201ENSMUST00000023426 Myt1Q8CFC2 1127 aa33.7■■■□□ 2.98
Cldnd1-201ENSMUST00000023426 Setd1aE9PYH6 1716 aa33.7■■■□□ 2.98
Cldnd1-201ENSMUST00000023426 Pde4cQ3UEI1 686 aa33.67■■■□□ 2.98
Cldnd1-201ENSMUST00000023426 Nsd2Q8BVE8 1365 aa33.62■■■□□ 2.97
Cldnd1-201ENSMUST00000023426 Cep170Q6A065 1588 aa33.61■■■□□ 2.97
Cldnd1-201ENSMUST00000023426 Eif5bQ05D44 1216 aaKnown RBP33.59■■■□□ 2.97
Cldnd1-201ENSMUST00000023426 Edc4Q3UJB9 1406 aaKnown RBP33.58■■■□□ 2.97
Cldnd1-201ENSMUST00000023426 Kidins220E9Q9B7 1793 aa33.58■■■□□ 2.97
Cldnd1-201ENSMUST00000023426 Kdm5cP41230 1554 aa33.57■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Adamts13Q769J6 1426 aa33.56■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Abca17E9PX95 1733 aa33.56■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Map3k5O35099 1380 aa33.55■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Kif1bQ60575 1816 aaKnown RBP33.55■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Usp54Q8BL06 1588 aaKnown RBP33.54■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Ifit1bl1D3Z6F0 470 aa33.53■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 ShprhQ7TPQ3 1674 aa33.52■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Anp32bQ9EST5 272 aaKnown RBP33.52■■■□□ 2.96
Cldnd1-201ENSMUST00000023426 Tubgcp6G5E8P0 1769 aa33.5■■■□□ 2.95
Cldnd1-201ENSMUST00000023426 Fam71e1A1L3C1 212 aa33.5■■■□□ 2.95
Cldnd1-201ENSMUST00000023426 Mroh3A0A1D5RM54 893 aa33.49■■■□□ 2.95
Cldnd1-201ENSMUST00000023426 Ofd1Q80Z25 1017 aa33.48■■■□□ 2.95
Cldnd1-201ENSMUST00000023426 Znf608Q56A10 1511 aa33.47■■■□□ 2.95
Cldnd1-201ENSMUST00000023426 Ythdc2B2RR83 1445 aaKnown RBP33.45■■■□□ 2.95
Cldnd1-201ENSMUST00000023426 Ylpm1Q9R0I7 1386 aaKnown RBP33.43■■■□□ 2.94
Cldnd1-201ENSMUST00000023426 Zmym4A2A791 1549 aaKnown RBP33.41■■■□□ 2.94
Cldnd1-201ENSMUST00000023426 Tulp4Q9JIL5 1547 aa33.4■■■□□ 2.94
Cldnd1-201ENSMUST00000023426 Arid4bA2CG63 1314 aaKnown RBP33.39■■■□□ 2.94
Cldnd1-201ENSMUST00000023426 Zfyve16Q80U44 1528 aa33.39■■■□□ 2.94
Cldnd1-201ENSMUST00000023426 Xrn1P97789 1719 aaKnown RBP33.38■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 Nolc1E9Q5C9 702 aaKnown RBP33.37■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 Nos1Q9Z0J4 1429 aa33.36■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 Wdr43Q6ZQL4 677 aaKnown RBP33.36■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 Zscan21Q07231 555 aa33.34■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 Rpgrip1lQ8CG73 1264 aa33.34■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 P3h3Q8CG70 732 aa33.33■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 PrxO55103 1391 aa33.33■■■□□ 2.93
Cldnd1-201ENSMUST00000023426 Sbno1Q689Z5 1390 aa33.32■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Uggt2E9Q4X2 1504 aa33.31■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Abcc6Q9R1S7 1498 aa33.31■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Pank3Q8R2W9 370 aa33.31■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 AnkarA2RT91 1465 aa33.3■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Myo5cE9Q1F5 1742 aa33.3■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Lemd3Q9WU40 921 aa33.3■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Ifnlr1Q8CGK5 535 aa33.29■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Abca9Q8K449 1623 aa33.29■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 Kif3bQ61771 747 aa33.26■■■□□ 2.92
Cldnd1-201ENSMUST00000023426 PtprtQ99M80 1454 aa33.26■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Tmf1B9EKI3 1091 aa33.25■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Ppp4r2Q0VGB7 417 aa33.25■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Znf518aB2RRF6 1478 aaKnown RBP33.25■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Srcin1Q9QWI6 1250 aa33.25■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Zbtb4Q5F293 982 aa33.23■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Ttbk1Q6PCN3 1308 aa33.23■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Erich6D3Z6S9 713 aa33.22■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Mak16Q8BGS0 296 aaKnown RBP33.22■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Zscan10Q3URR7 782 aa33.22■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Pola1P33609 1465 aa33.21■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 L3mbtl2P59178 703 aa33.21■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Ttc21bQ0HA38 1315 aa33.21■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Inpp5dQ9ES52 1191 aa33.2■■■□□ 2.91
Cldnd1-201ENSMUST00000023426 Fndc1E9Q043 1732 aa33.18■■■□□ 2.9
Cldnd1-201ENSMUST00000023426 Kank1E9Q238 1360 aa33.17■■■□□ 2.9
Cldnd1-201ENSMUST00000023426 Tmem131lQ3U3D7 1597 aa33.17■■■□□ 2.9
Cldnd1-201ENSMUST00000023426 Plch2A2AP18 1501 aa33.17■■■□□ 2.9
Cldnd1-201ENSMUST00000023426 Upf2A2AT37 1269 aaKnown RBP33.16■■■□□ 2.9
Cldnd1-201ENSMUST00000023426 Stard8Q8K031 1019 aa33.14■■■□□ 2.9
Cldnd1-201ENSMUST00000023426 ErbinQ80TH2 1402 aa33.14■■■□□ 2.9
Retrieved 100 of 22,080 RNA–protein pairs in 8 ms