RNA–Protein interactions for RNA: ENSMUST00000000500.6

Pdgfb-201, Transcript of Platelet-derived growth factor subunit B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfb, Length 2,918 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfb-201ENSMUST00000000500 Ccdc27Q3V036 639 aa29.58■■■□□ 2.33
Pdgfb-201ENSMUST00000000500 NeflP08551 543 aa29.57■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Rrp7aQ9D1C9 280 aaKnown RBP29.55■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Mak16Q8BGS0 296 aaKnown RBP29.55■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Kank1E9Q238 1360 aa29.53■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Mapkbp1Q6NS57 1503 aa29.52■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Ccdc141E9Q8Q6 1531 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Polr3aB2RXC6 1390 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Dnajc5bQ9CQ94 199 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Trpm2Q91YD4 1506 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Cpsf1Q9EPU4 1441 aaKnown RBP29.5■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 DroshaQ5HZJ0 1373 aaKnown RBP29.5■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 PrkcshO08795 521 aa29.5■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Mlh3A0A1Y7VMP7 1443 aa29.49■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Pank3Q8R2W9 370 aa29.46■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Mroh2aD3Z750 1679 aa29.46■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Upf2A2AT37 1269 aaKnown RBP29.45■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Asxl1P59598 1514 aa29.45■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Ifit1bl1D3Z6F0 470 aa29.44■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Inpp5dQ9ES52 1191 aa29.44■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Clstn2Q9ER65 966 aa29.41■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 ChgaP26339 463 aaKnown RBP29.4■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Dot1lQ6XZL8 1540 aa29.4■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Caskin1Q6P9K8 1431 aa29.39■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Prkrip1Q9CWV6 186 aaKnown RBP29.38■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Jph4Q80WT0 628 aa29.36■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Ssh2Q5SW75 1423 aa29.36■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Esx1O88933 382 aa29.35■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 PtprgQ05909 1442 aa29.35■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 PrxO55103 1391 aa29.34■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Cd109Q8R422 1442 aa29.34■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Rock1P70335 1354 aa29.34■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Pbrm1Q8BSQ9 1634 aaKnown RBP29.33■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Sart1Q9Z315 806 aaKnown RBP29.33■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 B4galnt3Q6L8S8 986 aa29.31■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Atp7aQ64430 1491 aa29.3■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 CrbnQ8C7D2 445 aa29.3■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Zscan10Q3URR7 782 aa29.28■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Iqgap1Q9JKF1 1657 aaKnown RBP29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Lrrc9Q8CDN9 1456 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Neo1P97798 1493 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Fmn2Q9JL04 1578 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Ttll13A4Q9F6 804 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Mink1Q9JM52 1308 aa29.26■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Mroh3A0A1D5RM54 893 aa29.26■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Kdm5cP41230 1554 aa29.25■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Trappc8E9PWG2 1437 aa29.24■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Erich6D3Z6S9 713 aa29.23■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Iqcf3Q9D498 203 aa29.22■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Zmym4A2A791 1549 aaKnown RBP29.22■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Tmf1B9EKI3 1091 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Slc4a1apE9PX68 744 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Hsp90aa1P07901 733 aaKnown RBP29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Kdm2aP59997 1161 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Dbr1Q923B1 550 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Gapvd1Q6PAR5 1458 aa29.2■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Apbb1Q9QXJ1 710 aa29.2■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 AknaQ80VW7 1404 aa29.2■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Adgrl2Q8JZZ7 1487 aa29.2■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Arhgap5P97393 1501 aa29.18■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Tarbp1E9Q368 1579 aa29.17■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Kif16bB1AVY7 1312 aa29.17■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Zcchc11B2RX14 1644 aaKnown RBP29.17■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Fancd2Q80V62 1450 aa29.16■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Ppp2r1aQ76MZ3 589 aa29.12■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Eif4g3Q80XI3 1579 aaKnown RBP29.12■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Hdac5Q9Z2V6 1113 aa29.12■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Spag9Q58A65 1321 aaKnown RBP29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 CanxP35564 591 aaKnown RBP29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Srcin1Q9QWI6 1250 aa29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 TnikP83510 1323 aa29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 DaxxO35613 739 aa29.1■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Pde4cQ3UEI1 686 aa29.1■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Os9Q8K2C7 672 aa29.1■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Ak9G3UYQ4 1894 aa29.09■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Rwdd1Q9CQK7 243 aa29.08■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Tubgcp6G5E8P0 1769 aa29.08■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Fam208aQ69ZR9 1610 aaKnown RBP29.07■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Neurod2Q62414 383 aa29.07■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Setd1aE9PYH6 1716 aa29.06■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Tex14Q7M6U3 1450 aa29.05■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Prdm10Q3UTQ7 1184 aa29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Plch2A2AP18 1501 aa29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Mbd3Q9Z2D8 285 aaKnown RBP29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Fam184bQ0KK56 942 aa29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Map3k5O35099 1380 aa29.03■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 4933416C03RikQ3V063 378 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Speer4f1Q9D5Q6 258 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Chmp5Q9D7S9 219 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Adamts13Q769J6 1426 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Dnmt1P13864 1620 aaKnown RBP29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Lrriq1Q0P5X1 1673 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Sall3Q62255 1320 aa29■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Arid4bA2CG63 1314 aaKnown RBP28.99■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Nlrp6Q91WS2 869 aa28.99■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 EspnQ9ET47 871 aa28.99■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Rab3gap2Q8BMG7 1366 aa28.97■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Nkx1-2P42580 305 aa28.97■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Kdm2bQ6P1G2 1309 aa28.97■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Edc4Q3UJB9 1406 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms