RNA–Protein interactions for RNA: ENSMUST00000000500.6

Pdgfb-201, Transcript of Platelet-derived growth factor subunit B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfb, Length 2,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfb-201ENSMUST00000000500 Ccdc27Q3V036 639 aa29.58■■■□□ 2.33
Pdgfb-201ENSMUST00000000500 NeflP08551 543 aa29.57■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Rrp7aQ9D1C9 280 aaKnown RBP29.55■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Mak16Q8BGS0 296 aaKnown RBP29.55■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Kank1E9Q238 1360 aa29.53■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Mapkbp1Q6NS57 1503 aa29.52■■■□□ 2.32
Pdgfb-201ENSMUST00000000500 Ccdc141E9Q8Q6 1531 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Polr3aB2RXC6 1390 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Dnajc5bQ9CQ94 199 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Trpm2Q91YD4 1506 aa29.51■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Cpsf1Q9EPU4 1441 aaKnown RBP29.5■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 DroshaQ5HZJ0 1373 aaKnown RBP29.5■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 PrkcshO08795 521 aa29.5■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Mlh3A0A1Y7VMP7 1443 aa29.49■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Pank3Q8R2W9 370 aa29.46■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Mroh2aD3Z750 1679 aa29.46■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Upf2A2AT37 1269 aaKnown RBP29.45■■■□□ 2.31
Pdgfb-201ENSMUST00000000500 Asxl1P59598 1514 aa29.45■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Ifit1bl1D3Z6F0 470 aa29.44■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Inpp5dQ9ES52 1191 aa29.44■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Clstn2Q9ER65 966 aa29.41■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 ChgaP26339 463 aaKnown RBP29.4■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Dot1lQ6XZL8 1540 aa29.4■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Caskin1Q6P9K8 1431 aa29.39■■■□□ 2.3
Pdgfb-201ENSMUST00000000500 Prkrip1Q9CWV6 186 aaKnown RBP29.38■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Jph4Q80WT0 628 aa29.36■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Ssh2Q5SW75 1423 aa29.36■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Esx1O88933 382 aa29.35■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 PtprgQ05909 1442 aa29.35■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 PrxO55103 1391 aa29.34■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Cd109Q8R422 1442 aa29.34■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Rock1P70335 1354 aa29.34■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Pbrm1Q8BSQ9 1634 aaKnown RBP29.33■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 Sart1Q9Z315 806 aaKnown RBP29.33■■■□□ 2.29
Pdgfb-201ENSMUST00000000500 B4galnt3Q6L8S8 986 aa29.31■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Atp7aQ64430 1491 aa29.3■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 CrbnQ8C7D2 445 aa29.3■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Zscan10Q3URR7 782 aa29.28■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Iqgap1Q9JKF1 1657 aaKnown RBP29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Lrrc9Q8CDN9 1456 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Neo1P97798 1493 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Fmn2Q9JL04 1578 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Ttll13A4Q9F6 804 aa29.27■■■□□ 2.28
Pdgfb-201ENSMUST00000000500 Mink1Q9JM52 1308 aa29.26■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Mroh3A0A1D5RM54 893 aa29.26■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Kdm5cP41230 1554 aa29.25■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Trappc8E9PWG2 1437 aa29.24■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Erich6D3Z6S9 713 aa29.23■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Iqcf3Q9D498 203 aa29.22■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Zmym4A2A791 1549 aaKnown RBP29.22■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Tmf1B9EKI3 1091 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Slc4a1apE9PX68 744 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Hsp90aa1P07901 733 aaKnown RBP29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Kdm2aP59997 1161 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Dbr1Q923B1 550 aa29.21■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Gapvd1Q6PAR5 1458 aa29.2■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Apbb1Q9QXJ1 710 aa29.2■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 AknaQ80VW7 1404 aa29.2■■■□□ 2.27
Pdgfb-201ENSMUST00000000500 Adgrl2Q8JZZ7 1487 aa29.2■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Arhgap5P97393 1501 aa29.18■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Tarbp1E9Q368 1579 aa29.17■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Kif16bB1AVY7 1312 aa29.17■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Zcchc11B2RX14 1644 aaKnown RBP29.17■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Fancd2Q80V62 1450 aa29.16■■■□□ 2.26
Pdgfb-201ENSMUST00000000500 Ppp2r1aQ76MZ3 589 aa29.12■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Eif4g3Q80XI3 1579 aaKnown RBP29.12■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Hdac5Q9Z2V6 1113 aa29.12■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Spag9Q58A65 1321 aaKnown RBP29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 CanxP35564 591 aaKnown RBP29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Srcin1Q9QWI6 1250 aa29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 TnikP83510 1323 aa29.11■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 DaxxO35613 739 aa29.1■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Pde4cQ3UEI1 686 aa29.1■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Os9Q8K2C7 672 aa29.1■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Ak9G3UYQ4 1894 aa29.09■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Rwdd1Q9CQK7 243 aa29.08■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Tubgcp6G5E8P0 1769 aa29.08■■■□□ 2.25
Pdgfb-201ENSMUST00000000500 Fam208aQ69ZR9 1610 aaKnown RBP29.07■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Neurod2Q62414 383 aa29.07■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Setd1aE9PYH6 1716 aa29.06■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Tex14Q7M6U3 1450 aa29.05■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Prdm10Q3UTQ7 1184 aa29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Plch2A2AP18 1501 aa29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Mbd3Q9Z2D8 285 aaKnown RBP29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Fam184bQ0KK56 942 aa29.04■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Map3k5O35099 1380 aa29.03■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 4933416C03RikQ3V063 378 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Speer4f1Q9D5Q6 258 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Chmp5Q9D7S9 219 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Adamts13Q769J6 1426 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Dnmt1P13864 1620 aaKnown RBP29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Lrriq1Q0P5X1 1673 aa29.02■■■□□ 2.24
Pdgfb-201ENSMUST00000000500 Sall3Q62255 1320 aa29■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Arid4bA2CG63 1314 aaKnown RBP28.99■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Nlrp6Q91WS2 869 aa28.99■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 EspnQ9ET47 871 aa28.99■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Rab3gap2Q8BMG7 1366 aa28.97■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Nkx1-2P42580 305 aa28.97■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Kdm2bQ6P1G2 1309 aa28.97■■■□□ 2.23
Pdgfb-201ENSMUST00000000500 Edc4Q3UJB9 1406 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms