RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 NDST4Q9H3R1 872 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 SLC5A4Q9NY91 659 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■□□□□ 10.9
PHGDH-209ENST00000641074 TOMM70O94826 608 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 RPL13P26373 211 aaKnown RBP20.06■□□□□ 0.8
PHGDH-209ENST00000641074 NPTX2P47972 431 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 POLGP54098 1239 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-209ENST00000641074 GTF2BQ00403 316 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 MAP2K5Q13163 448 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 EMC2Q15006 297 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 TARBP2Q15633 366 aaKnown RBP20.06■□□□□ 0.8
PHGDH-209ENST00000641074 PAXIP1Q6ZW49 1069 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-209ENST00000641074 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 GBP3Q9H0R5 595 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 DHX33Q9H6R0 707 aaKnown RBP20.06■□□□□ 0.8
PHGDH-209ENST00000641074 C17orf75Q9HAS0 396 aa20.06■□□□□ 0.8
PHGDH-209ENST00000641074 CCDC169A6NNP5 214 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 GYPCP04921 128 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 DMP1Q13316 513 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-209ENST00000641074 LAMC2Q13753 1193 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 NFIL3Q16649 462 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 CYP4F22Q6NT55 531 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 PLPPR4Q7Z2D5 763 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 SLC17A8Q8NDX2 589 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 NTPCRQ9BSD7 190 aaKnown RBP20.05■□□□□ 0.8
PHGDH-209ENST00000641074 AGPAT3Q9NRZ7 376 aa20.05■□□□□ 0.8
PHGDH-209ENST00000641074 EMSYQ7Z589 1322 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 DOCK3Q8IZD9 2030 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-209ENST00000641074 AKR1B15C9JRZ8 316 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-209ENST00000641074 AKAP3O75969 853 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 GH1P01241 217 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 MARK3P27448 753 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 SMTNP53814 917 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 RTP1P59025 263 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 ACVR2BQ13705 512 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 FKBP15Q5T1M5 1219 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 HS2ST1Q7LGA3 356 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 TRIM59Q8IWR1 403 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 SYCP3Q8IZU3 236 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 MSL3Q8N5Y2 521 aaKnown RBP20.04■□□□□ 0.8
PHGDH-209ENST00000641074 TMEM161BQ8NDZ6 487 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 SPIRE2Q8WWL2 714 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 FAM167AQ96KS9 214 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 ACCSQ96QU6 501 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 KIFC3Q9BVG8 833 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 POLR3FQ9H1D9 316 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-209ENST00000641074 TMX1Q9H3N1 280 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 ABHD16BQ9H3Z7 469 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 TMEM206Q9H813 350 aa20.04■□□□□ 0.8
PHGDH-209ENST00000641074 CASP14P31944 242 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 FXR1P51114 621 aaKnown RBP eCLIP20.03■□□□□ 0.86e-7■■■■□ 19.4
PHGDH-209ENST00000641074 SYCP1Q15431 976 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-209ENST00000641074 ERGIC2Q96RQ1 377 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 KMT5AQ9NQR1 393 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 HOXC6P09630 235 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 RFC5P40937 340 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 CASP4P49662 377 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 FRMD5Q7Z6J6 570 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 GOLGA5Q8TBA6 731 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 ATP8B4Q8TF62 1192 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 SLC7A3Q8WY07 619 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 USP6NLQ92738 828 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 EMID1Q96A84 441 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-209ENST00000641074 TMEM143Q96AN5 459 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 SMARCAD1Q9H4L7 1026 aa20.03■□□□□ 0.8
PHGDH-209ENST00000641074 ZHX1Q9UKY1 873 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-209ENST00000641074 RNF225M0QZC1 329 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-209ENST00000641074 SLC16A3O15427 465 aaKnown RBP20.02■□□□□ 0.8
PHGDH-209ENST00000641074 CA12O43570 354 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 MFAP3LO75121 409 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 SMPD1P17405 629 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 KLK7P49862 253 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 TRIM14Q14142 442 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 PLCB4Q15147 1175 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 TMEM139Q8IV31 216 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 CCDC112Q8NEF3 446 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 DMAC2Q9NW81 257 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 FLRT1Q9NZU1 646 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 ARMCX3Q9UH62 379 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-209ENST00000641074 TBX20Q9UMR3 447 aa20.02■□□□□ 0.8
PHGDH-209ENST00000641074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.02■□□□□ 0.8
PHGDH-209ENST00000641074 RASSF10A6NK89 507 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 CLCN1P35523 988 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 SLC26A2P50443 739 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 DUSP28Q4G0W2 176 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 PPTC7Q8NI37 304 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 AFG1LQ8WV93 481 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 IFT74Q96LB3 600 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 GJD2Q9UKL4 321 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 ADGRA3Q8IWK6 1321 aa20.01■□□□□ 0.79
PHGDH-209ENST00000641074 DENND3A2RUS2 1198 aa20■□□□□ 0.79
PHGDH-209ENST00000641074 ZBTB42B2RXF5 422 aa20■□□□□ 0.79
PHGDH-209ENST00000641074 TISP43B9A030 160 aa20■□□□□ 0.79
PHGDH-209ENST00000641074 NRDCO43847 1150 aa20■□□□□ 0.79
PHGDH-209ENST00000641074 MAFO75444 373 aaPredicted RBP20■□□□□ 0.79
PHGDH-209ENST00000641074 TPM1P09493 284 aa20■□□□□ 0.79
PHGDH-209ENST00000641074 EPB41P11171 864 aaKnown RBP20■□□□□ 0.79
PHGDH-209ENST00000641074 ARL2P36404 184 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms