RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-211ENST00000641009 TMEM161AQ9NX61 479 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 EML1O00423 815 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 LINC01565O15544 149 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 NCK2O43639 380 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 FGFR4P22455 802 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 FAM189BP81408 668 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 CLUL1Q15846 466 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 PUS10Q3MIT2 529 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 XKR3Q5GH77 459 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 PIK3AP1Q6ZUJ8 805 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 ADGRD2Q7Z7M1 963 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 NEK8Q86SG6 692 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 NLRP7Q8WX94 980 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 NIFKQ9BYG3 293 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 ATP6V0A4Q9HBG4 840 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 TYW1Q9NV66 732 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 ORC3Q9UBD5 711 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 PCDHGC5Q9Y5F6 944 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 TBX10O75333 385 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 CSDE1O75534 798 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 LARGE1O95461 756 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 DARSP14868 501 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 XBP1P17861 261 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 EARS2Q5JPH6 523 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 C1QTNF1Q9BXJ1 281 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 ELAC1Q9H777 363 aaKnown RBP15.65■□□□□ 0.1
LINC00339-211ENST00000641009 VAV3Q9UKW4 847 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 PCDHB12Q9Y5F1 795 aa15.65■□□□□ 0.1
LINC00339-211ENST00000641009 DDX11L8A8MPP1 907 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 CCNT1O60563 726 aaKnown RBP15.64■□□□□ 0.09
LINC00339-211ENST00000641009 ZSCAN20P17040 1043 aaPredicted RBP15.64■□□□□ 0.09
LINC00339-211ENST00000641009 SSTR3P32745 418 aaPredicted RBP15.64■□□□□ 0.09
LINC00339-211ENST00000641009 ANKRD1Q15327 319 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 PLA2G4FQ68DD2 849 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 PPP4R3AQ6IN85 833 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 GJD3Q8N144 294 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 ZNF710Q8N1W2 664 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 COLGALT1Q8NBJ5 622 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 CWH43Q9H720 699 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 KCNMB3Q9NPA1 279 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 RNF19AQ9NV58 838 aa15.64■□□□□ 0.09
LINC00339-211ENST00000641009 WDFY4Q6ZS81 3184 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 IGKV6-21A0A0C4DH24 114 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 FAM205CA6NFA0 338 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 FGF18O76093 207 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 FDPSP14324 419 aaKnown RBP15.63■□□□□ 0.09
LINC00339-211ENST00000641009 PSMC5P62195 406 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 PPP2R5CQ13362 524 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 ME3Q16798 604 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 LRRC55Q6ZSA7 311 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 ANO5Q75V66 913 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 RBM23Q86U06 439 aaKnown RBP15.63■□□□□ 0.09
LINC00339-211ENST00000641009 ECHDC2Q86YB7 292 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 RNF169Q8NCN4 708 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 CASD1Q96PB1 797 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 AAASQ9NRG9 546 aa15.63■□□□□ 0.09
LINC00339-211ENST00000641009 A0A087WZ62 844 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 GCFC2P16383 781 aaKnown RBP15.62■□□□□ 0.09
LINC00339-211ENST00000641009 QARSP47897 775 aaKnown RBP15.62■□□□□ 0.09
LINC00339-211ENST00000641009 NRIP1P48552 1158 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 NDUFV1P49821 464 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 NR5A1Q13285 461 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 ADAM15Q13444 863 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 KSR1Q8IVT5 923 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 THNSL1Q8IYQ7 743 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 HAS1Q92839 578 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 PPP2R3CQ969Q6 453 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 FDXACB1Q9BRP7 624 aaPredicted RBP15.62■□□□□ 0.09
LINC00339-211ENST00000641009 GCOM2Q9BZD3 368 aaPredicted RBP15.62■□□□□ 0.09
LINC00339-211ENST00000641009 TMEM117Q9H0C3 514 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 WRAP73Q9P2S5 460 aaPredicted RBP15.62■□□□□ 0.09
LINC00339-211ENST00000641009 FAM50BQ9Y247 325 aa15.62■□□□□ 0.09
LINC00339-211ENST00000641009 FAM86C2PA6NEL3 165 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 PI4K2BG5E9Z4 385 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 MBTPS2O43462 519 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 MAFO75444 373 aaPredicted RBP15.61■□□□□ 0.09
LINC00339-211ENST00000641009 LAG3P18627 525 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 DNM2P50570 870 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 NPEPPSP55786 919 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 UBE3AQ05086 875 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 ZP2Q05996 745 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 CLLU1OSQ5K130 101 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 ABI1Q8IZP0 508 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
LINC00339-211ENST00000641009 MICAL1Q8TDZ2 1067 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 WASF1Q92558 559 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 GTF3C6Q969F1 213 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 LRFN3Q9BTN0 628 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 CYP26B1Q9NR63 512 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 TLR9Q9NR96 1032 aa15.61■□□□□ 0.09
LINC00339-211ENST00000641009 SUCLA2Q9P2R7 463 aaPredicted RBP15.61■□□□□ 0.09
LINC00339-211ENST00000641009 A0A0U1RQF3 1178 aa15.6■□□□□ 0.09
LINC00339-211ENST00000641009 PER2O15055 1255 aa15.6■□□□□ 0.09
LINC00339-211ENST00000641009 HOXA2O43364 376 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms