RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 SLC44A3Q8N4M1 653 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
SCARB2-226ENST00000640916 TRAPPC12Q8WVT3 735 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 NELL1Q92832 810 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 ACSF2Q96CM8 615 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-226ENST00000640916 SH2B1Q9NRF2 756 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-226ENST00000640916 C1orf112Q9NSG2 853 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 DZANK1Q9NVP4 752 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 TMEM161AQ9NX61 479 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 ERAP1Q9NZ08 941 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 SPG21Q9NZD8 308 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 IGSF9Q9P2J2 1179 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 NCDNQ9UBB6 729 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 SIT1Q9Y3P8 196 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 DOCK6Q96HP0 2047 aa9.36□□□□□ -0.91
SCARB2-226ENST00000640916 MYH15Q9Y2K3 1946 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 GCOM1H8Y6P7 765 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-226ENST00000640916 STAM2O75886 525 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 CXCL14O95715 111 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 POLR2MP0CAP2 368 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 KCNA2P16389 499 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 KRT76Q01546 638 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 KRT17Q04695 432 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 WTAPQ15007 396 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 GNPTABQ3T906 1256 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 TMEM173Q86WV6 379 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-226ENST00000640916 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 ZBTB44Q8NCP5 570 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 GPR152Q8TDT2 470 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 SEPT1Q8WYJ6 367 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 ZNF558Q96NG5 402 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 FOXQ1Q9C009 403 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 TMEM117Q9H0C3 514 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 ZBP1Q9H171 429 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
SCARB2-226ENST00000640916 ST3GAL5Q9UNP4 418 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 IRAK3Q9Y616 596 aa9.35□□□□□ -0.91
SCARB2-226ENST00000640916 RALGAPA1Q6GYQ0 2036 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 RRN3P2A6NIE6 340 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 SLC30A4O14863 429 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 ZBTB5O15062 677 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 SPTLC1O15269 473 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 RPLP2P05387 115 aaKnown RBP9.34□□□□□ -0.91
SCARB2-226ENST00000640916 PARP1P09874 1014 aaKnown RBP9.34□□□□□ -0.91
SCARB2-226ENST00000640916 SRFP11831 508 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 PPM1AP35813 382 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 PLCB4Q15147 1175 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 CLLU1OSQ5K130 101 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 CCDC149Q6ZUS6 474 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-226ENST00000640916 PJA1Q8NG27 643 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 OTUD7AQ8TE49 926 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-226ENST00000640916 BORCS6Q96GS4 357 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 SLC4A5Q9BY07 1137 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 EPC1Q9H2F5 836 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 SMARCAD1Q9H4L7 1026 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 ATP6V0A4Q9HBG4 840 aa9.34□□□□□ -0.91
SCARB2-226ENST00000640916 ZMYM6O95789 1325 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 MTCL1Q9Y4B5 1905 aaKnown RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 SMIM35A0A1B0GVV1 85 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 DENND3A2RUS2 1198 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 NT5C1B-RDH14C9J2C7 533 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 M0QZ92 97 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 DHX16O60231 1041 aaKnown RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 RPS6KA5O75582 802 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 CTSAP10619 480 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 PCP11498 1178 aaKnown RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 PMLP29590 882 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 STARD6P59095 220 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 PTGDRQ13258 359 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 PCNX4Q63HM2 1172 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 MTHFD1LQ6UB35 978 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 MFSD6Q6ZSS7 791 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 FAM43BQ6ZT52 329 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 FAM228AQ86W67 206 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 KIAA0319LQ8IZA0 1049 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 VPS52Q8N1B4 723 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 NME8Q8N427 588 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 BCL7CQ8WUZ0 217 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 GLG1Q92896 1179 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 MYADMQ96S97 322 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 VN1R3Q9BXE9 311 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 DCTPP1Q9H773 170 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 KAT14Q9H8E8 782 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 SFXN1Q9H9B4 322 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 ARHGEF3Q9NR81 526 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 EPS15L1Q9UBC2 864 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 MAD2L2Q9UI95 211 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 FBXO4Q9UKT5 387 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 SMG5Q9UPR3 1016 aaKnown RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 MTF2Q9Y483 593 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-226ENST00000640916 PCDHGA2Q9Y5H1 932 aa9.33□□□□□ -0.92
SCARB2-226ENST00000640916 WDFY3Q8IZQ1 3526 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
SCARB2-226ENST00000640916 ZFYVE26Q68DK2 2539 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 289.8 ms