RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 C1orf186Q6ZWK4 172 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 RHPN2Q8IUC4 686 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 EXOC8Q8IYI6 725 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 ASAP3Q8TDY4 903 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 PRPF31Q8WWY3 499 aaKnown RBP14.67□□□□□ -0.06
GTF3A-209ENST00000640289 DHX58Q96C10 678 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 OSMRQ99650 979 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 LBHD1Q9BQE6 289 aaPredicted RBP14.67□□□□□ -0.06
GTF3A-209ENST00000640289 CELF4Q9BZC1 486 aaKnown RBP14.67□□□□□ -0.06
GTF3A-209ENST00000640289 POLR3FQ9H1D9 316 aaPredicted RBP14.67□□□□□ -0.06
GTF3A-209ENST00000640289 GOLPH3LQ9H4A5 285 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 FAM13BQ9NYF5 915 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 DNAH12Q6ZR08 3092 aa14.67□□□□□ -0.06
GTF3A-209ENST00000640289 NPHP3-ACAD11A0A0J9YXS1 232 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 A0A1W2PQ27 194 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 A0A1W2PQ64 194 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 A0A1W2PQD8 194 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 M0QZ92 97 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 GAS2O43903 313 aaKnown RBP14.66□□□□□ -0.06
GTF3A-209ENST00000640289 RPLP2P05387 115 aaKnown RBP14.66□□□□□ -0.06
GTF3A-209ENST00000640289 GHRP10912 638 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 PFKFB1P16118 471 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 CMA1P23946 247 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 ARL2P36404 184 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
GTF3A-209ENST00000640289 ARSHQ5FYA8 562 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 C16orf59Q7L2K0 433 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 GPBP1Q86WP2 473 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 MCPH1Q8NEM0 835 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 TMEM40Q8WWA1 233 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 TCP11Q8WWU5 503 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 PSPC1Q8WXF1 523 aaKnown RBP14.66□□□□□ -0.06
GTF3A-209ENST00000640289 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 STK17AQ9UEE5 414 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 KCNH3Q9ULD8 1083 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 COL4A3BPQ9Y5P4 624 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 LTBP2Q14767 1821 aa14.66□□□□□ -0.06
GTF3A-209ENST00000640289 ARID2Q68CP9 1835 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 A0A087WZ62 844 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
GTF3A-209ENST00000640289 HIP1RO75146 1068 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 GLRA2P23416 452 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 LAMTOR4Q0VGL1 99 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 PPIGQ13427 754 aaKnown RBP eCLIP14.65□□□□□ -0.06
GTF3A-209ENST00000640289 LPIN1Q14693 890 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 TCTN1Q2MV58 587 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 FBXO47Q5MNV8 452 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 DAW1Q8N136 415 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 FSIP1Q8NA03 581 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 NLRP7Q8WX94 980 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 STAMQ92783 540 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 NLRP4Q96MN2 994 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 SCLT1Q96NL6 688 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 GDF15Q99988 308 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 FDXACB1Q9BRP7 624 aaPredicted RBP14.65□□□□□ -0.06
GTF3A-209ENST00000640289 IL23AQ9NPF7 189 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 HPSEQ9Y251 543 aa14.65□□□□□ -0.06
GTF3A-209ENST00000640289 GADD45BO75293 160 aaPredicted RBP14.64□□□□□ -0.07
GTF3A-209ENST00000640289 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
GTF3A-209ENST00000640289 CXCL10P02778 98 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 SRGAP2CP0DJJ0 459 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 RFC2P35250 354 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 NDUFA8P51970 172 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 MAPK7Q13164 816 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 CAPSQ13938 189 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 SV2BQ7L1I2 683 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 MRPS27Q92552 414 aaKnown RBP14.64□□□□□ -0.07
GTF3A-209ENST00000640289 AGO3Q9H9G7 860 aaKnown RBP14.64□□□□□ -0.07
GTF3A-209ENST00000640289 SERTAD1Q9UHV2 236 aa14.64□□□□□ -0.07
GTF3A-209ENST00000640289 NOC2LQ9Y3T9 749 aaKnown RBP14.64□□□□□ -0.07
GTF3A-209ENST00000640289 KAT6AQ92794 2004 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 FAM237AA0A1B0GTK4 181 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 GOLGA6L4A6NEF3 574 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 MYMKA6NI61 221 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 SFI1A8K8P3 1242 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 PARNO95453 639 aaKnown RBP14.63□□□□□ -0.07
GTF3A-209ENST00000640289 FGFR4P22455 802 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 GUCY2CP25092 1073 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 CD52P31358 61 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 CRYBB1P53674 252 aaPredicted RBP14.63□□□□□ -0.07
GTF3A-209ENST00000640289 MXD4Q14582 209 aaPredicted RBP14.63□□□□□ -0.07
GTF3A-209ENST00000640289 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 ZNF365Q70YC5 407 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 DYMQ7RTS9 669 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 ZNF410Q86VK4 478 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 IQUBQ8NA54 791 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 TMEM87AQ8NBN3 555 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 RNF149Q8NC42 400 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 DBF4BQ8NFT6 615 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.63□□□□□ -0.07
GTF3A-209ENST00000640289 REEP2Q9BRK0 252 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
GTF3A-209ENST00000640289 IFT122Q9HBG6 1241 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 TANC1Q9C0D5 1861 aa14.63□□□□□ -0.07
GTF3A-209ENST00000640289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 ASAP2O43150 1006 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 ACTN4O43707 911 aaKnown RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 RPS6KA5O75582 802 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 KRT18P05783 430 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms