RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 IGSF22Q8N9C0 903 aa5.44□□□□□ -1.54
CCDC7-211ENST00000638889 ERCC4Q92889 916 aaPredicted RBP5.44□□□□□ -1.54
CCDC7-211ENST00000638889 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
CCDC7-211ENST00000638889 CLIP3Q96DZ5 547 aa5.44□□□□□ -1.54
CCDC7-211ENST00000638889 DENND2AQ9ULE3 1009 aa5.44□□□□□ -1.54
CCDC7-211ENST00000638889 REXO2Q9Y3B8 237 aaKnown RBP5.44□□□□□ -1.54
CCDC7-211ENST00000638889 ROM1Q03395 351 aa5.43□□□□□ -1.54
CCDC7-211ENST00000638889 CNGB1Q14028 1251 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-211ENST00000638889 DGKDQ16760 1214 aa5.43□□□□□ -1.54
CCDC7-211ENST00000638889 BRAPQ7Z569 592 aa5.43□□□□□ -1.54
CCDC7-211ENST00000638889 SNTG2Q9NY99 539 aa5.43□□□□□ -1.54
CCDC7-211ENST00000638889 FAM221BA6H8Z2 402 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 PRLP01236 227 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 MAN2A2P49641 1150 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 BPIFB4P59827 614 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 NANOS3P60323 173 aaKnown RBP5.42□□□□□ -1.54
CCDC7-211ENST00000638889 ADAM8P78325 824 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 ABHD17CQ6PCB6 329 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 FAM111BQ6SJ93 734 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 PCSK4Q6UW60 755 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 ZNF627Q7L945 461 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 GSPT2Q8IYD1 628 aaKnown RBP5.42□□□□□ -1.54
CCDC7-211ENST00000638889 NKD2Q969F2 451 aaPredicted RBP5.42□□□□□ -1.54
CCDC7-211ENST00000638889 MKL1Q969V6 931 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 MAML3Q96JK9 1138 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 ACSS2Q9NR19 701 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 SLC2A4RGQ9NR83 387 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 KCMF1Q9P0J7 381 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
CCDC7-211ENST00000638889 C2orf78A6NCI8 922 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 B4E1Z4 1266 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 E9PSI1 815 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 TRAF5O00463 557 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 RAMP2O60895 175 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 GTF2F1P35269 517 aaKnown RBP eCLIP5.41□□□□□ -1.54
CCDC7-211ENST00000638889 PTGS2P35354 604 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 STAT3P40763 770 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 SCNN1GP51170 649 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 MECP2P51608 486 aaKnown RBP5.41□□□□□ -1.54
CCDC7-211ENST00000638889 SMAD3P84022 425 aaKnown RBP5.41□□□□□ -1.54
CCDC7-211ENST00000638889 SLC6A3Q01959 620 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 TCIRG1Q13488 830 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 Q6ZRM9 215 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 GAREM2Q75VX8 874 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 FGD2Q7Z6J4 655 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 DNAJC10Q8IXB1 793 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 ANKRD53Q8N9V6 530 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 OR5AN1Q8NGI8 311 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 THAP3Q8WTV1 239 aaPredicted RBP5.41□□□□□ -1.54
CCDC7-211ENST00000638889 RPL10LQ96L21 214 aaKnown RBP5.41□□□□□ -1.54
CCDC7-211ENST00000638889 GPHA2Q96T91 129 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 DNAJC7Q99615 494 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 TRIM39Q9HCM9 518 aa5.41□□□□□ -1.54
CCDC7-211ENST00000638889 RBM8AQ9Y5S9 174 aaKnown RBP5.41□□□□□ -1.54
CCDC7-211ENST00000638889 TMEM191CA6NGB0 347 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 GOLGA8BA8MQT2 603 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 PPFIA2O75334 1257 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 CYP17A1P05093 508 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 RGS3P49796 1198 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 ANTXR2P58335 489 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 SLC25A3Q00325 362 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 KRTAP1-1Q07627 177 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 TOB2Q14106 344 aaPredicted RBP5.4□□□□□ -1.54
CCDC7-211ENST00000638889 ELAVL1Q15717 326 aaKnown RBP5.4□□□□□ -1.54
CCDC7-211ENST00000638889 SOGA3Q5TF21 947 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 MFSD5Q6N075 450 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 BMP8AQ7Z5Y6 402 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 CLEC14AQ86T13 490 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 DDX53Q86TM3 631 aaKnown RBP5.4□□□□□ -1.54
CCDC7-211ENST00000638889 NME9Q86XW9 330 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 ZG16BQ96DA0 208 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 C8orf37Q96NL8 207 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 SRPK1Q96SB4 655 aaKnown RBP5.4□□□□□ -1.54
CCDC7-211ENST00000638889 AGAP2Q99490 1192 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 TCF25Q9BQ70 676 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 IL23AQ9NPF7 189 aa5.4□□□□□ -1.54
CCDC7-211ENST00000638889 XDHP47989 1333 aa5.4□□□□□ -1.55
CCDC7-211ENST00000638889 UBA6A0AVT1 1052 aaPredicted RBP5.39□□□□□ -1.55
CCDC7-211ENST00000638889 UBE2QL1A1L167 161 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 PLD2O14939 933 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 FOXN1O15353 648 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 VSIG10L2P0DP72 767 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 KRT4P19013 534 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 KIF11P52732 1056 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 BCAR1P56945 870 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 C2orf27AQ580R0 203 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 TTC38Q5R3I4 469 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 SLFN12LQ6IEE8 588 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 Q6ZPA2 131 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 HTR3DQ70Z44 454 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 PLA2G15Q8NCC3 412 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 GPR87Q9BY21 358 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 HAPLN2Q9GZV7 340 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 NCOA5Q9HCD5 579 aaKnown RBP5.39□□□□□ -1.55
CCDC7-211ENST00000638889 GPRC5BQ9NZH0 403 aa5.39□□□□□ -1.55
CCDC7-211ENST00000638889 JUNP05412 331 aaKnown RBP5.38□□□□□ -1.55
CCDC7-211ENST00000638889 ACAP1Q15027 740 aa5.38□□□□□ -1.55
CCDC7-211ENST00000638889 ZCCHC8Q6NZY4 707 aaKnown RBP5.38□□□□□ -1.55
CCDC7-211ENST00000638889 CHST14Q8NCH0 376 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms