RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 MXD3Q9BW11 206 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TPX2Q9ULW0 747 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 MYO3BQ8WXR4 1341 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TLDC2A0PJX2 215 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SMIM23A6NLE4 172 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 MEIS2O14770 477 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TGFB1I1O43294 461 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SLC26A4O43511 780 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TMEM253P0C7T8 217 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CCDC172P0C7W6 258 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CHN1P15882 459 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 EIF3BP55884 814 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 GTF2IP78347 998 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 PLS1Q14651 629 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 DRAP1Q14919 205 aaPredicted RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 PREPLQ4J6C6 727 aaPredicted RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 LACTB2Q53H82 288 aaPredicted RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 UBAP2Q5T6F2 1119 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 AADACL2Q6P093 401 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 ERP44Q9BS26 406 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 FAM129AQ9BZQ8 928 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CNOT10Q9H9A5 744 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TAS2R14Q9NYV8 317 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SNX24Q9Y343 169 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 DAAM1Q9Y4D1 1078 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 FOCADQ5VW36 1801 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 PMS2P54278 862 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 PLTPP55058 493 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SNAP25P60880 206 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CEP57Q86XR8 500 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CTNNBL1Q8WYA6 563 aaPredicted RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 LENG9Q96B70 501 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 BORCS6Q96GS4 357 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SCLT1Q96NL6 688 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SEPT11Q9NVA2 429 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 POLLQ9UGP5 575 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 DNAJC12Q9UKB3 198 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 MMEP08473 750 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 TAL1P17542 331 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 LMNB1P20700 586 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 KLRC3Q07444 240 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 JAMLQ86YT9 394 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 KSR1Q8IVT5 923 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 FBXO25Q8TCJ0 367 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 TBC1D22AQ8WUA7 517 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 ALG3Q92685 438 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 THAP2Q9H0W7 228 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 ZMYM2Q9UBW7 1377 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 FAM86B1E9PN63 330 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 FAM86B2P0C5J1 330 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 NMT1P30419 496 aaKnown RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 COG2Q14746 738 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 ZC2HC1CQ53FD0 456 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 ZDHHC24Q6UX98 284 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 SLC30A10Q6XR72 485 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 UHMK1Q8TAS1 419 aaKnown RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 NEK9Q8TD19 979 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 CRYGNQ8WXF5 182 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 ZNF317Q96PQ6 595 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 SYT11Q9BT88 431 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 CARD9Q9H257 536 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 ADAM7Q9H2U9 754 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 MCM8Q9UJA3 840 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-204ENST00000638725 COG5Q9UP83 839 aa11.83□□□□□ -0.52
SNIP1-204ENST00000638725 GOLGA6L10A0A0M3HER8 536 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 NUDT17P0C025 328 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 KRT13P13646 458 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 XRCC4Q13426 336 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 NEDD9Q14511 834 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 KIAA1755Q5JYT7 1200 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 SPDYCQ5MJ68 293 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 CCDC197Q8NCU1 140 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 GIMAP7Q8NHV1 300 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 C18orf8Q96DM3 657 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 GPR88Q9GZN0 384 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 PABPC3Q9H361 631 aaKnown RBP11.82□□□□□ -0.52
SNIP1-204ENST00000638725 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
SNIP1-204ENST00000638725 TRIM37O94972 964 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 TRIM49P0CI25 452 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 TRIM49CP0CI26 452 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 PSMC2P35998 433 aaKnown RBP11.82□□□□□ -0.52
SNIP1-204ENST00000638725 FMO5P49326 533 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms