RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ANKRD40Q6AI12 368 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 LRRC57Q8N9N7 239 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 CENPKQ9BS16 269 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 TMEM165Q9HC07 324 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 ITGB1BP2Q9UKP3 347 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 EP400Q96L91 3159 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 ANXA13P27216 316 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 KLRC3Q07444 240 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 MTFR1Q15390 333 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 CLUL1Q15846 466 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 VPS72Q15906 364 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 IL17AQ16552 155 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 NAALADL2Q58DX5 795 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 CNNM4Q6P4Q7 775 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 UNC13DQ70J99 1090 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 TSPAN18Q96SJ8 248 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 C7orf25Q9BPX7 421 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 RANBP17Q9H2T7 1088 aaKnown RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 METTL14Q9HCE5 456 aaKnown RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 GGT7Q9UJ14 662 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 WNT7AO00755 349 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 TTI1O43156 1089 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 MCAMP43121 646 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 IFNAR2P48551 515 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 BPIFB4P59827 614 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 MGAT5Q09328 741 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 MPP3Q13368 585 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 TSHZ1Q6ZSZ6 1077 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 CEP128Q6ZU80 1094 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 NELFCDQ8IXH7 590 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SUPT20HQ8NEM7 779 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 PPP2R3CQ969Q6 453 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SLC35B4Q969S0 331 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SMC6Q96SB8 1091 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 YIPF2Q9BWQ6 316 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 PHACTR1Q9C0D0 580 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 PCDH18Q9HCL0 1135 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 FAM207AQ9NSI2 230 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 ATP9BO43861 1147 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 ZPR1O75312 459 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 E2F6O75461 281 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 VIL1P09327 827 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 EIF4BP23588 611 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 USP46P62068 366 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SEC23AQ15436 765 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 USH1GQ495M9 461 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 LIN52Q52LA3 116 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 TDRD12Q587J7 1177 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 RASIP1Q5U651 963 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SLFN11Q7Z7L1 901 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 ECHDC2Q86YB7 292 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SLC17A8Q8NDX2 589 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF653Q96CK0 615 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 PUS3Q9BZE2 481 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SUCLA2Q9P2R7 463 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 PACSIN2Q9UNF0 486 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
CAPN3-221ENST00000638141 DAAM1Q9Y4D1 1078 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
CAPN3-221ENST00000638141 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 DDAH1O94760 285 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 ASLP04424 464 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 CALML3P27482 149 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 ATP5DP30049 168 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 POLGP54098 1239 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 PTENP60484 403 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 AMPD3Q01432 767 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 GIT2Q14161 759 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 MAP7Q14244 749 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms