RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	PCDHA6	Q9UN73	950 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	KCNJ14	Q9UNX9	436 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PCDHA8	Q9Y5H6	950 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PCDHA2	Q9Y5H9	948 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	USP34	Q70CQ2	3546 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	WDR81	Q562E7	1941 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	LOXHD1	Q8IVV2	1947 aa		10.68	□□□□□ -0.7
CACNA1A-256	ENST00000637981	TBKBP1	A7MCY6	615 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	MAFG	O15525	162 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	FGF18	O76093	207 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ERVFC1	P60507	584 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	KRT76	Q01546	638 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PLCB4	Q15147	1175 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	UBE2S	Q16763	222 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PTPN21	Q16825	1174 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	DUSP6	Q16828	381 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	JAKMIP3	Q5VZ66	844 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	THNSL1	Q8IYQ7	743 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	NME8	Q8N427	588 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ATOH1	Q92858	354 aa	Predicted RBP	10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	NAP1L4	Q99733	375 aa	Known RBP	10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ANO3	Q9BYT9	981 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	FOXP1	Q9H334	677 aa	Predicted RBP	10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	TMEM260	Q9NX78	707 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SLC9A2	Q9UBY0	812 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	GINS2	Q9Y248	185 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	KDM3A	Q9Y4C1	1321 aa		10.67	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SMIM35	A0A1B0GVV1	85 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	DENND3	A2RUS2	1198 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	MGEA5	O60502	916 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SRGAP2B	P0DMP2	458 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SP100	P23497	879 aa	Predicted RBP	10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ZNF76	P36508	570 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SREBF1	P36956	1147 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	TEC	P42680	631 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	STAT5B	P51692	787 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	USP11	P51784	963 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	NONO	Q15233	471 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	FAM102B	Q5T8I3	360 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PLPP4	Q5VZY2	271 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PDE12	Q6L8Q7	609 aa	Known RBP	10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	MTHFD1L	Q6UB35	978 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PLPPR4	Q7Z2D5	763 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ZBTB33	Q86T24	672 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	DIS3L2	Q8IYB7	885 aa	Known RBP	10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	COLGALT1	Q8NBJ5	622 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ADAM2	Q99965	735 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SDF4	Q9BRK5	362 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	APOL5	Q9BWW9	433 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	S1PR5	Q9H228	398 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ERVK-5	Q9HDB9	667 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	KCNH7	Q9NS40	1196 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	TYW1	Q9NV66	732 aa	Known RBP	10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	HCST	Q9UBK5	93 aa		10.66	□□□□□ -0.7
CACNA1A-256	ENST00000637981	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981		H0Y858	1186 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	FSCN2	O14926	492 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	RPS6KA5	O75582	802 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	PDGFB	P01127	241 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	FOSB	P53539	338 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ACTR2	P61160	394 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	KCNC3	Q14003	757 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	MCTP1	Q6DN14	999 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	ANKRD54	Q6NXT1	300 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	LLGL2	Q6P1M3	1020 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	TMEM184A	Q6ZMB5	413 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	SLC24A5	Q71RS6	500 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	RIPOR3	Q96MK2	946 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	MXRA8	Q9BRK3	442 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	CDHR5	Q9HBB8	845 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	RGS18	Q9NS28	235 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	C1orf112	Q9NSG2	853 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	NOC2L	Q9Y3T9	749 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	NFASC	O94856	1347 aa		10.65	□□□□□ -0.7
CACNA1A-256	ENST00000637981	BTBD18	B2RXH4	712 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981		C9IYK1	514 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981		M0R2N6	131 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	GPR182	O15218	404 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	DTNB	O60941	627 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CYP3A4	P08684	503 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FGFR1	P11362	822 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	GCFC2	P16383	781 aa	Known RBP	10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LAG3	P18627	525 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SYT1	P21579	422 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	U2AF2	P26368	475 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	KLRC1	P26715	233 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	GUCY1B3	Q02153	619 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NPY5R	Q15761	445 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ODR4	Q5SWX8	454 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SYCE2	Q6PIF2	218 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MOXD1	Q6UVY6	613 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NOSTRIN	Q8IVI9	506 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CYP2W1	Q8TAV3	490 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RASGRP4	Q8TDF6	673 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TMEM40	Q8WWA1	233 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TCF25	Q9BQ70	676 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CWH43	Q9H720	699 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ATP6V0A4	Q9HBG4	840 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ENTPD7	Q9NQZ7	604 aa		10.64	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms