RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 DTHD1Q6ZMT9 781 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 FERMT3Q86UX7 667 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 LINC01465Q8N7H1 131 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 MAFAQ8NHW3 353 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 TGS1Q96RS0 853 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 ADAM2Q99965 735 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 ATP6V0A4Q9HBG4 840 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 TUFT1Q9NNX1 390 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 COL4A3BPQ9Y5P4 624 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 A0A087WWV3 80 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 A0A087WZ62 844 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 LAD1O00515 517 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 ARHGEF15O94989 841 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 FGFR4P22455 802 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 SFPQP23246 707 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 BRAPQ7Z569 592 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 KSR1Q8IVT5 923 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 SNX29Q8TEQ0 813 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 LINC01599Q8WXQ3 324 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 HSD17B14Q9BPX1 270 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 FDXACB1Q9BRP7 624 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 TSPYL2Q9H2G4 693 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 ADAMTS10Q9H324 1103 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 ANKEF1Q9NU02 776 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 PCDHB7Q9Y5E2 793 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 TTC3P53804 2025 aa16.06■□□□□ 0.16
CACNA1A-249ENST00000637777 IGKV6-21A0A0C4DH24 114 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 LINC01553A4QN01 128 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 ARHGEF35A5YM69 484 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 RFXAPO00287 272 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 MED24O75448 989 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 DARSP14868 501 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 PAN2Q504Q3 1202 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 SPOUT1Q5T280 376 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 KRT79Q5XKE5 535 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 MAEAQ7L5Y9 396 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 CATSPER4Q7RTX7 472 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 ZNF410Q86VK4 478 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 CATSPER3Q86XQ3 398 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 FIBCD1Q8N539 461 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 STK24Q9Y6E0 443 aa16.05■□□□□ 0.16
CACNA1A-249ENST00000637777 NLRC5Q86WI3 1866 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 MGEA5O60502 916 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 DGAT1O75907 488 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 LYPLA2O95372 231 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 SARSP49591 514 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 HTRA4P83105 476 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 SPRED2Q7Z698 418 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 FBXO22Q8NEZ5 403 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 GDPD5Q8WTR4 605 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 PRPF31Q8WWY3 499 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 CEP89Q96ST8 783 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 C17orf80Q9BSJ5 609 aa16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 POLR3CQ9BUI4 534 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-249ENST00000637777 COL4A4P53420 1690 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 RPA1P27694 616 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 CTNNB1P35222 781 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 PHKA2P46019 1235 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 RARRES1P49788 294 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 LAMTOR4Q0VGL1 99 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 TFDP1Q14186 410 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 SLC24A5Q71RS6 500 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 RNF149Q8NC42 400 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 RGS18Q9NS28 235 aa16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 PIN4Q9Y237 131 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-249ENST00000637777 EPOPA6NHQ4 379 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 PP2D1A8MPX8 630 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 ASAP2O43150 1006 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 ERLIN2O94905 339 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 SPATA31C1P0DKV0 1188 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms