RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MTERF2Q49AM1 385 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 FILIP1LQ4L180 1135 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 FAM102BQ5T8I3 360 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 APTXQ7Z2E3 356 aaKnown RBP16.92■□□□□ 0.3
CLN6-219ENST00000637329 GOLGA5Q8TBA6 731 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
CLN6-219ENST00000637329 CEP89Q96ST8 783 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 SRRTQ9BXP5 876 aaKnown RBP16.92■□□□□ 0.3
CLN6-219ENST00000637329 XPNPEP1Q9NQW7 623 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 ERAP1Q9NZ08 941 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 FLRT1Q9NZU1 646 aa16.92■□□□□ 0.3
CLN6-219ENST00000637329 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
CLN6-219ENST00000637329 MYH11P35749 1972 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 COL1A2P08123 1366 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
CLN6-219ENST00000637329 GNA14O95837 355 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 LGALS2P05162 132 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 TPM2P07951 284 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 CYP2B6P20813 491 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 CTGFP29279 349 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 SMTNP53814 917 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 SP3Q02447 781 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 TNFAIP2Q03169 654 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 KRT31Q15323 416 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
CLN6-219ENST00000637329 IRF2BP1Q8IU81 584 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 OR6J1Q8NGC5 347 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 CNOT6LQ96LI5 555 aaKnown RBP16.91■□□□□ 0.3
CLN6-219ENST00000637329 CGNQ9P2M7 1197 aaKnown RBP16.91■□□□□ 0.3
CLN6-219ENST00000637329 IMPACTQ9P2X3 320 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 Q9Y3F1 56 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 ZSWIM8A7E2V4 1837 aa16.91■□□□□ 0.3
CLN6-219ENST00000637329 SFI1A8K8P3 1242 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 HBP1O60381 514 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 PPFIA4O75335 1185 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 MAFO75444 373 aaPredicted RBP16.9■□□□□ 0.3
CLN6-219ENST00000637329 PTMAP06454 111 aaKnown RBP16.9■□□□□ 0.3
CLN6-219ENST00000637329 MMP3P08254 477 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 NMT1P30419 496 aaKnown RBP16.9■□□□□ 0.3
CLN6-219ENST00000637329 MARSP56192 900 aaKnown RBP16.9■□□□□ 0.3
CLN6-219ENST00000637329 SNRPFP62306 86 aaKnown RBP16.9■□□□□ 0.3
CLN6-219ENST00000637329 PLCB4Q15147 1175 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 PPP2R5AQ15172 486 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 CCL14Q16627 93 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 AFG1LQ8WV93 481 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 IFT74Q96LB3 600 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
CLN6-219ENST00000637329 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
CLN6-219ENST00000637329 SIP14410 1827 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 SLC16A3O15427 465 aaKnown RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 PRPF6O94906 941 aaKnown RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 GNRH1P01148 92 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 RPL13P26373 211 aaKnown RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 CYP2C19P33261 490 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 HOXD13P35453 343 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 GTF2BQ00403 316 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 DGKDQ16760 1214 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 HSP90AA4PQ58FG1 418 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 TMEM63BQ5T3F8 832 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 GJC2Q5T442 439 aaPredicted RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 MFSD14CQ5VZR4 134 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 FILIP1Q7Z7B0 1213 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 TRIM50Q86XT4 487 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 VSTM4Q8IW00 320 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 TCP11Q8WWU5 503 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 ACCSQ96QU6 501 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 SH2D3AQ9BRG2 576 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 NTPCRQ9BSD7 190 aaKnown RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 POLR3FQ9H1D9 316 aaPredicted RBP16.89■□□□□ 0.29
CLN6-219ENST00000637329 GPRC5CQ9NQ84 441 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 TRPC6Q9Y210 931 aa16.89■□□□□ 0.29
CLN6-219ENST00000637329 A6NJR5 290 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 CETN3O15182 167 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 AKR1A1P14550 325 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 NAMPTP43490 491 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 NPTX2P47972 431 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 CPT1AP50416 773 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 PEX3P56589 373 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 MYBPC2Q14324 1141 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 ZNF484Q5JVG2 852 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 MAEAQ7L5Y9 396 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
CLN6-219ENST00000637329 HAUS6Q7Z4H7 955 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 TLK2Q86UE8 772 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 NAP1L5Q96NT1 182 aaPredicted RBP16.88■□□□□ 0.29
CLN6-219ENST00000637329 ARHGAP39Q9C0H5 1083 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 GBP3Q9H0R5 595 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
CLN6-219ENST00000637329 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 EXOC7Q9UPT5 735 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms