RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 RECQL4O94761 1208 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 IPO13O94829 963 aaKnown RBP2.39□□□□□ -2.03
SCN1A-215ENST00000637285 C1RP00736 705 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 AMY2AP04746 511 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 MMEP08473 750 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 HK1P19367 917 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 AMY2BP19961 511 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 ZFP36P26651 326 aaKnown RBP2.39□□□□□ -2.03
SCN1A-215ENST00000637285 PLA2G5P39877 138 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 ABCG1P45844 678 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 HERVK_113P62684 666 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 TCIRG1Q13488 830 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 NTRK3Q16288 839 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 SLC10A6Q3KNW5 377 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 FIGNQ5HY92 759 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 KRT40Q6A162 431 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 EEPD1Q7L9B9 569 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 CXorf67Q86X51 503 aaPredicted RBP2.39□□□□□ -2.03
SCN1A-215ENST00000637285 C9orf106Q8NAJ2 232 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 HIPK4Q8NE63 616 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 SEC16BQ96JE7 1060 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 KRTAP1-5Q9BYS1 174 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF768Q9H5H4 540 aaKnown RBP2.39□□□□□ -2.03
SCN1A-215ENST00000637285 EIF2B4Q9UI10 523 aaKnown RBP2.39□□□□□ -2.03
SCN1A-215ENST00000637285 VWA7Q9Y334 891 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 MRVI1Q9Y6F6 885 aa2.39□□□□□ -2.03
SCN1A-215ENST00000637285 DNAJC9-AS1A6NH13 148 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 GYPEP15421 78 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 POU3F3P20264 500 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 CXCR5P32302 372 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 GJA8P48165 433 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 PTTG1IPP53801 180 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 ELLP55199 621 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 JAM2P57087 298 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 SESN2P58004 480 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 MAP3K12Q12852 859 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 PAK1Q13153 545 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 MAPK7Q13164 816 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 HSP90AA2PQ14568 343 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 PRR16Q569H4 304 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 STYK1Q6J9G0 422 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 MFSD5Q6N075 450 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 HTR3DQ70Z44 454 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 BCL6BQ8N143 479 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 MDGA1Q8NFP4 955 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 GFM2Q969S9 779 aaKnown RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF512Q96ME7 567 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 GBP4Q96PP9 640 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 LRFN3Q9BTN0 628 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 DENND2AQ9ULE3 1009 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 STRIP2Q9ULQ0 834 aa2.38□□□□□ -2.03
SCN1A-215ENST00000637285 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.38□□□□□ -2.03
SCN1A-215ENST00000637285 ASXL2Q76L83 1435 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 PYGMP11217 842 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 PABPC1P11940 636 aaKnown RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 TYRP1P17643 537 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 GNAT2P19087 354 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 APEX1P27695 318 aaKnown RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 AVPR1BP47901 424 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 ADAM8P78325 824 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 IFRD2Q12894 506 aaPredicted RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 FOXF2Q12947 444 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 SEC23AQ15436 765 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 FXNQ16595 210 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 CCDC62Q6P9F0 684 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 NSMFQ6X4W1 530 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 MAMDC2Q7Z304 686 aaPredicted RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 SIMC1Q8NDZ2 872 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 CALML6Q8TD86 181 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 ASB15Q8WXK1 588 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 ST8SIA2Q92186 375 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 ERCC4Q92889 916 aaPredicted RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 FBXW5Q969U6 566 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 MYEOVQ96EZ4 313 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 AARSD1Q9BTE6 412 aaKnown RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 EPN3Q9H201 632 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 SAE1Q9UBE0 346 aaPredicted RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 CBLCQ9ULV8 474 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 TRAF6Q9Y4K3 522 aa2.37□□□□□ -2.03
SCN1A-215ENST00000637285 EPN1Q9Y6I3 576 aaPredicted RBP2.37□□□□□ -2.03
SCN1A-215ENST00000637285 AHRRA9YTQ3 701 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 SCDO00767 359 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 TRIM24O15164 1050 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 CLASP2O75122 1294 aaKnown RBP2.36□□□□□ -2.03
SCN1A-215ENST00000637285 STC2O76061 302 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 TOX4O94842 621 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 GJB6O95452 261 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 SRGAP2CP0DJJ0 459 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 VSIG10L2P0DP72 767 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF16P17020 682 aaPredicted RBP2.36□□□□□ -2.03
SCN1A-215ENST00000637285 ZNF81P51508 661 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 SEC24CP53992 1094 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 FAM189BP81408 668 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 FOXI1Q12951 378 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 CRY1Q16526 586 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 FAM214AQ32MH5 1076 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 TNNI3KQ59H18 835 aa2.36□□□□□ -2.03
SCN1A-215ENST00000637285 NAIF1Q69YI7 327 aaPredicted RBP2.36□□□□□ -2.03
SCN1A-215ENST00000637285 GRASPQ7Z6J2 395 aaPredicted RBP2.36□□□□□ -2.03
SCN1A-215ENST00000637285 MTDHQ86UE4 582 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms