RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 FMO5P49326 533 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 CIAPIN1Q6FI81 312 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 PHLDB3Q6NSJ2 640 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 ATG4CQ96DT6 458 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 IGSF9BQ9UPX0 1349 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 PAFAH1B1P43034 410 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 GUCY2FP51841 1108 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 DNAJC21Q5F1R6 531 aaKnown RBP20.6■□□□□ 0.89
CLN5-216ENST00000636780 ZNF746Q6NUN9 644 aaPredicted RBP20.6■□□□□ 0.89
CLN5-216ENST00000636780 FOXR1Q6PIV2 292 aa20.6■□□□□ 0.89
CLN5-216ENST00000636780 PRPF38AQ8NAV1 312 aaKnown RBP20.6■□□□□ 0.89
CLN5-216ENST00000636780 BBXQ8WY36 941 aaPredicted RBP20.6■□□□□ 0.89
CLN5-216ENST00000636780 SYN2Q92777 582 aaPredicted RBP20.6■□□□□ 0.89
CLN5-216ENST00000636780 BACH1O14867 736 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 TCP1P17987 556 aaKnown RBP20.59■□□□□ 0.89
CLN5-216ENST00000636780 VCAM1P19320 739 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 COPB2P35606 906 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 GUCY2DQ02846 1103 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 MTMR1Q13613 665 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 NAA35Q5VZE5 725 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 TTC19Q6DKK2 380 aaPredicted RBP20.59■□□□□ 0.89
CLN5-216ENST00000636780 FOXR2Q6PJQ5 311 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 B3GNT9Q6UX72 402 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 PLEKHO2Q8TD55 490 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 RPAP3Q9H6T3 665 aaPredicted RBP20.59■□□□□ 0.89
CLN5-216ENST00000636780 FAM204AQ9H8W3 233 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 NFU1Q9UMS0 254 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 RNF40O75150 1001 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 CCNE2O96020 404 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 USP8P40818 1118 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 PEX3P56589 373 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 LLGL1Q15334 1064 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 MEI1Q5TIA1 1274 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 FAM160B2Q86V87 743 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 DDX42Q86XP3 938 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLN5-216ENST00000636780 EPB41L5Q9HCM4 733 aa20.59■□□□□ 0.89
CLN5-216ENST00000636780 FRMPD4Q14CM0 1322 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 HSD17B4P51659 736 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 PPP3CAQ08209 521 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 MCTP2Q6DN12 878 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 C8orf74Q6P047 294 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 SLC20A1Q8WUM9 679 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 GPR88Q9GZN0 384 aa20.58■□□□□ 0.89
CLN5-216ENST00000636780 FOXN3O00409 490 aaPredicted RBP20.58■□□□□ 0.88
CLN5-216ENST00000636780 CEP104O60308 925 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 JAM2P57087 298 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 HS2ST1Q7LGA3 356 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 MICALL2Q8IY33 904 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 MMGT1Q8N4V1 131 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 OLIG1Q8TAK6 271 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 JDP2Q8WYK2 163 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 SAAL1Q96ER3 474 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 RMDN3Q96TC7 470 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 AGO4Q9HCK5 861 aaKnown RBP20.58■□□□□ 0.88
CLN5-216ENST00000636780 PLCB1Q9NQ66 1216 aa20.58■□□□□ 0.88
CLN5-216ENST00000636780 ITGA4P13612 1032 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 GAP43P17677 238 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 RARRES1P49788 294 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 GALCP54803 685 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 BAATQ14032 418 aaPredicted RBP20.57■□□□□ 0.88
CLN5-216ENST00000636780 ARHGEF19Q8IW93 802 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 NUCKS1Q9H1E3 243 aaKnown RBP20.57■□□□□ 0.88
CLN5-216ENST00000636780 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 HACL1Q9UJ83 578 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 FRMD4BQ9Y2L6 1034 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 NFKBIEO00221 500 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 HSP90B2PQ58FF3 399 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 FAM102BQ5T8I3 360 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 FAM83AQ86UY5 434 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 CCDC127Q96BQ5 260 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
CLN5-216ENST00000636780 F8VZ95 297 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 GMPSP49915 693 aaPredicted RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 ZNF131P52739 623 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 CFAP221Q4G0U5 840 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 AADACL2Q6P093 401 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 RNF10Q8N5U6 811 aaKnown RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 ARHGEF26Q96DR7 871 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 ZBED3Q96IU2 234 aaPredicted RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 INTS2Q9H0H0 1204 aaKnown RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 METTL14Q9HCE5 456 aaKnown RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 PCDHGC5Q9Y5F6 944 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 TBC1D12O60347 775 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 EIF3JO75822 258 aaKnown RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 YWHABP31946 246 aaKnown RBP20.56■□□□□ 0.88
CLN5-216ENST00000636780 TAF3Q5VWG9 929 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 AGBL3Q8NEM8 1001 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 PIM2Q9P1W9 311 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 NR2E1Q9Y466 385 aa20.56■□□□□ 0.88
CLN5-216ENST00000636780 HEXIM1O94992 359 aaKnown RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 PGM5Q15124 567 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 CPNE8Q86YQ8 564 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 AENQ8WTP8 325 aaKnown RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 SLC38A10Q9HBR0 1119 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 UBE2TQ9NPD8 197 aaPredicted RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 TOPORSQ9NS56 1045 aaPredicted RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 STIM2Q9P246 746 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 TARSL2A2RTX5 802 aaKnown RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 CCDC169A6NNP5 214 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms