RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ATN1P54259 1190 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 ZNF746Q6NUN9 644 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 IMPACTQ9P2X3 320 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 NRBP1Q9UHY1 535 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 KCNA2P16389 499 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 FAM47EQ6ZV65 393 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 DYDC2Q96IM9 177 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 MAN1C1Q9NR34 630 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 TMEM161AQ9NX61 479 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 SOAT1P35610 550 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 ANKS3Q6ZW76 656 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 TJP2Q9UDY2 1190 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 MAP3K1Q13233 1512 aa19.04■□□□□ 0.64
CACNA1A-227ENST00000636549 CASP1P29466 404 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 GCLMP48507 274 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 GPSM2P81274 684 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 PRKCQQ04759 706 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 VEPH1Q14D04 833 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 DHX38Q92620 1227 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 L3MBTL3Q96JM7 780 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 GEMIN8Q9NWZ8 242 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 MCM8Q9UJA3 840 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 FOSP01100 380 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 MXI1P50539 228 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 PAPOLAP51003 745 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 SLC16A1P53985 500 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 CACUL1Q86Y37 369 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 BEST2Q8NFU1 509 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 TTLL11Q8NHH1 800 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 IGFLR1Q9H665 355 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 EMILIN3Q9NT22 766 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 F8W8V4 182 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 EAF2Q96CJ1 260 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 CYP4F11Q9HBI6 524 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 TTI1O43156 1089 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 IMPDH2P12268 514 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 EFHBQ8N7U6 833 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 OSBPL10Q9BXB5 764 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 BHMT2Q9H2M3 363 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 EPN1Q9Y6I3 576 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 A8MXQ7 604 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 TUBB4AP04350 444 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 PDGFRBP09619 1106 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 SP100P23497 879 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 NFKBIAP25963 317 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 MGAT5BQ3V5L5 792 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 BTBD8Q5XKL5 378 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 VN1R5Q7Z5H4 357 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 NUP93Q8N1F7 819 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 KANSL2Q9H9L4 492 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 PCDHA6Q9UN73 950 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 PCDHA8Q9Y5H6 950 aa19.03■□□□□ 0.64
CACNA1A-227ENST00000636549 PLEKHA8P1O95397 391 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 KRT14P02533 472 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 ATP5JP18859 108 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 UBE4BO95155 1302 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 MAP3K13O43283 966 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 PDCLQ13371 301 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 TADA2BQ86TJ2 420 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 SLC25A41Q8N5S1 370 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 AIFM3Q96NN9 605 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 GABBR1Q9UBS5 961 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 ANAPC7Q9UJX3 599 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 COL17A1Q9UMD9 1497 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 C6orf222P0C671 652 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 FCER1AP12319 257 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 MAP4P27816 1152 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 PRAMEP78395 509 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 BBOF1Q8ND07 529 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 GPBP1L1Q9HC44 474 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 V9GYQ6 96 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 ZFYVE9O95405 1425 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 SEMA3EO15041 775 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 P4HA2O15460 535 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 TMPRSS15P98073 1019 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 ARMC6Q6NXE6 501 aa19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 PUS7LQ9H0K6 701 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 DHX35Q9H5Z1 703 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-227ENST00000636549 hCG_2014768A0A024R1R8 64 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L15C9J2P7 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L13C9JLJ4 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L11C9JVI0 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L18D6R9N7 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L22D6RA61 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L17D6RBQ6 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L19D6RCP7 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L20D6RJB6 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 H0Y3Z8 333 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L24Q0WX57 530 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 USP17L6PQ6QN14 398 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 TEX12Q9BXU0 123 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 KLC2Q9H0B6 622 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 TMEM206Q9H813 350 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 SEL1LQ9UBV2 794 aa19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.63
CACNA1A-227ENST00000636549 ORC4O43929 436 aa19.01■□□□□ 0.63
CACNA1A-227ENST00000636549 LONP1P36776 959 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-227ENST00000636549 CHCHD3Q9NX63 227 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-227ENST00000636549 RGS7P49802 495 aa19.01■□□□□ 0.63
CACNA1A-227ENST00000636549 SNCBQ16143 134 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms