RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 IRS1P35568 1242 aa20.64■□□□□ 0.89
CLN6-214ENST00000636314 DLX2Q07687 328 aaPredicted RBP20.64■□□□□ 0.89
CLN6-214ENST00000636314 NFX1Q12986 1120 aaKnown RBP20.64■□□□□ 0.89
CLN6-214ENST00000636314 XKR3Q5GH77 459 aa20.64■□□□□ 0.89
CLN6-214ENST00000636314 ODR4Q5SWX8 454 aa20.64■□□□□ 0.89
CLN6-214ENST00000636314 EFCAB12Q6NXP0 572 aa20.64■□□□□ 0.89
CLN6-214ENST00000636314 LRRC71Q8N4P6 559 aa20.64■□□□□ 0.89
CLN6-214ENST00000636314 OSMRQ99650 979 aa20.64■□□□□ 0.89
CLN6-214ENST00000636314 PIEZO1Q92508 2521 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 MBTPS2O43462 519 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 LINC00271P0C7V0 271 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 CRYBB1P53674 252 aaPredicted RBP20.63■□□□□ 0.89
CLN6-214ENST00000636314 PSMC5P62195 406 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 SAFBQ15424 915 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLN6-214ENST00000636314 CTC1Q2NKJ3 1217 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 MTERF2Q49AM1 385 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 SLFN12Q8IYM2 578 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 LINC01465Q8N7H1 131 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 TMEM40Q8WWA1 233 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 HAS1Q92839 578 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 CDHR5Q9HBB8 845 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 RC3H2Q9HBD1 1191 aaKnown RBP20.63■□□□□ 0.89
CLN6-214ENST00000636314 ERVK-5Q9HDB9 667 aa20.63■□□□□ 0.89
CLN6-214ENST00000636314 NOC2LQ9Y3T9 749 aaKnown RBP20.63■□□□□ 0.89
CLN6-214ENST00000636314 EML1O00423 815 aa20.62■□□□□ 0.89
CLN6-214ENST00000636314 BAG4O95429 457 aaKnown RBP20.62■□□□□ 0.89
CLN6-214ENST00000636314 GTF2F1P35269 517 aaKnown RBP eCLIP20.62■□□□□ 0.891e-6■■■■□ 26
CLN6-214ENST00000636314 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
CLN6-214ENST00000636314 GUCY1B3Q02153 619 aa20.62■□□□□ 0.89
CLN6-214ENST00000636314 RABEP1Q15276 862 aa20.62■□□□□ 0.89
CLN6-214ENST00000636314 SMAD2Q15796 467 aaKnown RBP20.62■□□□□ 0.89
CLN6-214ENST00000636314 CLP1Q92989 425 aaKnown RBP20.62■□□□□ 0.89
CLN6-214ENST00000636314 C8orf76Q96K31 380 aa20.62■□□□□ 0.89
CLN6-214ENST00000636314 POP1Q99575 1024 aaKnown RBP20.62■□□□□ 0.89
CLN6-214ENST00000636314 NIFKQ9BYG3 293 aaKnown RBP20.62■□□□□ 0.89
CLN6-214ENST00000636314 TMEM150BA6NC51 233 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 GPR182O15218 404 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 DKC1O60832 514 aaKnown RBP eCLIP20.61■□□□□ 0.89
CLN6-214ENST00000636314 GPR32O75388 356 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 QARSP47897 775 aaKnown RBP20.61■□□□□ 0.89
CLN6-214ENST00000636314 MRE11P49959 708 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 NHLH1Q02575 133 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 TARBP2Q15633 366 aaKnown RBP20.61■□□□□ 0.89
CLN6-214ENST00000636314 NCAPH2Q6IBW4 605 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 FAM43BQ6ZT52 329 aaPredicted RBP20.61■□□□□ 0.89
CLN6-214ENST00000636314 NPAS4Q8IUM7 802 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 ZNF710Q8N1W2 664 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 FAM184AQ8NB25 1140 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 ZNF689Q96CS4 500 aaPredicted RBP20.61■□□□□ 0.89
CLN6-214ENST00000636314 FBXL18Q96ME1 805 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 SCLT1Q96NL6 688 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 TMX1Q9H3N1 280 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 ALG13Q9NP73 1137 aaKnown RBP20.61■□□□□ 0.89
CLN6-214ENST00000636314 MUTYHQ9UIF7 546 aa20.61■□□□□ 0.89
CLN6-214ENST00000636314 PLXNA4Q9HCM2 1894 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 DENND3A2RUS2 1198 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 DDX11L8A8MPP1 907 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 LINC01565O15544 149 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 ST18O60284 1047 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 NEMFO60524 1076 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 TBX10O75333 385 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 STBD1O95210 358 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 STAG3L1P0CL83 205 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 NLRP11P59045 1033 aaKnown RBP20.6■□□□□ 0.89
CLN6-214ENST00000636314 SMAD4Q13485 552 aaKnown RBP20.6■□□□□ 0.89
CLN6-214ENST00000636314 CALCRLQ16602 461 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 HFE2Q6ZVN8 426 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 RTN4RL1Q86UN2 441 aaPredicted RBP20.6■□□□□ 0.89
CLN6-214ENST00000636314 FAM228AQ86W67 206 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 SH2D3AQ9BRG2 576 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 KCNH6Q9H252 994 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 CD207Q9UJ71 328 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 ST3GAL5Q9UNP4 418 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 ARID2Q68CP9 1835 aa20.6■□□□□ 0.89
CLN6-214ENST00000636314 ZNF318Q5VUA4 2279 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 DGKIO75912 1065 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 P4HBP07237 508 aaKnown RBP20.59■□□□□ 0.89
CLN6-214ENST00000636314 IBSPP21815 317 aaPredicted RBP20.59■□□□□ 0.89
CLN6-214ENST00000636314 NDUFV1P49821 464 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 EPHA7Q15375 998 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 PLA2G4FQ68DD2 849 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 LXNQ9BS40 222 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 LRFN2Q9ULH4 789 aa20.59■□□□□ 0.89
CLN6-214ENST00000636314 MRPL42Q9Y6G3 142 aaKnown RBP20.59■□□□□ 0.89
CLN6-214ENST00000636314 MGEA5O60502 916 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 SARSP49591 514 aaKnown RBP20.58■□□□□ 0.89
CLN6-214ENST00000636314 GPC3P51654 580 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 PAN2Q504Q3 1202 aaKnown RBP20.58■□□□□ 0.89
CLN6-214ENST00000636314 ANO5Q75V66 913 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 RNF135Q8IUD6 432 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 NLRP7Q8WX94 980 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 PPP2R3CQ969Q6 453 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 ZNF668Q96K58 619 aaPredicted RBP20.58■□□□□ 0.89
CLN6-214ENST00000636314 MFSD14AQ96MC6 490 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 ADAM2Q99965 735 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 ADAMTS10Q9H324 1103 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 C1orf112Q9NSG2 853 aa20.58■□□□□ 0.89
CLN6-214ENST00000636314 PLAGL2Q9UPG8 496 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms