RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	PLS1	Q14651	629 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	NPY5R	Q15761	445 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	UAP1	Q16222	522 aa	Predicted RBP	11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	SLC4A8	Q2Y0W8	1093 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	PPP1R18	Q6NYC8	613 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	HEATR3	Q7Z4Q2	680 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	HOOK3	Q86VS8	718 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	PTPRN2	Q92932	1015 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	MRI	Q9BWK5	157 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	TTYH3	Q9C0H2	523 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	RMI1	Q9H9A7	625 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	RMND1	Q9NWS8	449 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	GALNT8	Q9NY28	637 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	TFR2	Q9UP52	801 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	PCDHA13	Q9Y5I0	950 aa		11.65	□□□□□ -0.54
CHD2-223	ENST00000636306	ATP5H	O75947	161 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	TMCC1	O94876	653 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	NAPA	P54920	295 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	INHBC	P55103	352 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	EVX2	Q03828	476 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	PTGDR	Q13258	359 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	TRIM68	Q6AZZ1	485 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	C2CD5	Q86YS7	1000 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	SLC44A5	Q8NCS7	719 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	STK32A	Q8WU08	396 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	C17orf50	Q8WW18	174 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	PRCC	Q92733	491 aa	Predicted RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	CCDC17	Q96LX7	622 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	RPS6KC1	Q96S38	1066 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	TLR10	Q9BXR5	811 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	ZCWPW1	Q9H0M4	648 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	MAGEF1	Q9HAY2	307 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	ARHGEF10L	Q9HCE6	1279 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	LRWD1	Q9UFC0	647 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	SERPINB13	Q9UIV8	391 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	CAPN6	Q9Y6Q1	641 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	PSME4	Q14997	1843 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	MOCS3	O95396	460 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	CCNB1	P14635	433 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	PDE6C	P51160	858 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	MRPS25	P82663	173 aa	Known RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	ZNF174	Q15697	407 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	WASHC2D	Q5SRD0	308 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	RRAGB	Q5VZM2	374 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	KIAA0825	Q8IV33	1275 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	LRRC34	Q8IZ02	419 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	STKLD1	Q8NE28	680 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	ASAP3	Q8TDY4	903 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	ATP8B4	Q8TF62	1192 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	DYDC1	Q8WWB3	177 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	DNAJC9	Q8WXX5	260 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	SYMPK	Q92797	1274 aa	Known RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	FAM136A	Q96C01	138 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	SHISA4	Q96DD7	197 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	CCDC42	Q96M95	316 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	AGAP3	Q96P47	875 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	DHX36	Q9H2U1	1008 aa	Known RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	FAM114A2	Q9NRY5	505 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	CYP39A1	Q9NYL5	469 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	DLGAP2	Q9P1A6	1054 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	LARS	Q9P2J5	1176 aa	Known RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	SUN2	Q9UH99	717 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	LRCH1	Q9Y2L9	728 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	USP15	Q9Y4E8	981 aa	Predicted RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	DUSP10	Q9Y6W6	482 aa		11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	COL2A1	P02458	1487 aa	Predicted RBP	11.64	□□□□□ -0.55
CHD2-223	ENST00000636306	MROH7	Q68CQ1	1323 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	ZNF646	O15015	1829 aa	Predicted RBP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	FAM205C	A6NFA0	338 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	TMEM221	A6NGB7	291 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	MAP3K13	O43283	966 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	SART1	O43290	800 aa	Known RBP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	SNX3	O60493	162 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	NPM3	O75607	178 aa	Known RBP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	SUN1	O94901	812 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	TTLL1	O95922	423 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	MME	P08473	750 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	FAM200B	P0CF97	657 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	RFC5	P40937	340 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	MMP13	P45452	471 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	GABPA	Q06546	454 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	PICALM	Q13492	652 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	NONO	Q15233	471 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	STRIP1	Q5VSL9	837 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	RINL	Q6ZS11	566 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	ZNF365	Q70YC5	407 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	AGGF1	Q8N302	714 aa	eCLIP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	KCNV2	Q8TDN2	545 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	NELFB	Q8WX92	580 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	CEP95	Q96GE4	821 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	NOX5	Q96PH1	765 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	GBP5	Q96PP8	586 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	ELAC2	Q9BQ52	826 aa	Known RBP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	IFIH1	Q9BYX4	1025 aa	Known RBP	11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	MIS12	Q9H081	205 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	ZMYND12	Q9H0C1	365 aa		11.63	□□□□□ -0.55
CHD2-223	ENST00000636306	CUEDC2	Q9H467	287 aa		11.63	□□□□□ -0.55

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