RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TMEM143Q96AN5 459 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 JPH2Q9BR39 696 aaPredicted RBP16■□□□□ 0.15
LINC00339-208ENST00000634934 REEP2Q9BRK0 252 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 XPNPEP1Q9NQW7 623 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 GTF2IRD1Q9UHL9 959 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 TREHO43280 583 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 HIP1RO75146 1068 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 TBCAO75347 108 aaKnown RBP15.99■□□□□ 0.15
LINC00339-208ENST00000634934 CAVIN2O95810 425 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 MYL1P05976 194 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 CAPN2P17655 700 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 GUCY2CP25092 1073 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 GIT2Q14161 759 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
LINC00339-208ENST00000634934 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
LINC00339-208ENST00000634934 SESTD1Q86VW0 696 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 ELOA2Q8IYF1 753 aaPredicted RBP15.99■□□□□ 0.15
LINC00339-208ENST00000634934 GPRC5CQ9NQ84 441 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 PDLIM7Q9NR12 457 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 PCDH10Q9P2E7 1040 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 RSPH10B2B2RC85 870 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 ARVCFO00192 962 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 FAM13AO94988 1023 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 SMC2O95347 1197 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 RSPH10BP0C881 870 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 CYP2C9P11712 490 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 DNM2P50570 870 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 CLCN3P51790 818 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
LINC00339-208ENST00000634934 DPYDQ12882 1025 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 MAP7D2Q96T17 732 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 TIPINQ9BVW5 301 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 POLR3FQ9H1D9 316 aaPredicted RBP15.99■□□□□ 0.15
LINC00339-208ENST00000634934 NOD1Q9Y239 953 aa15.99■□□□□ 0.15
LINC00339-208ENST00000634934 IGKV6-21A0A0C4DH24 114 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 MBLAC1A4D2B0 266 aaPredicted RBP15.98■□□□□ 0.15
LINC00339-208ENST00000634934 SFI1A8K8P3 1242 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 GAS2O43903 313 aaKnown RBP15.98■□□□□ 0.15
LINC00339-208ENST00000634934 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
LINC00339-208ENST00000634934 TMOD1P28289 359 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 HOXC8P31273 242 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 ADAM17P78536 824 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 DRP2Q13474 957 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 PTGISQ16647 500 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 LRRC26Q2I0M4 334 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 RUFY4Q6ZNE9 571 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 TCP11Q8WWU5 503 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 FAM49AQ9H0Q0 323 aaPredicted RBP15.98■□□□□ 0.15
LINC00339-208ENST00000634934 TRMT13Q9NUP7 481 aaKnown RBP15.98■□□□□ 0.15
LINC00339-208ENST00000634934 PANK4Q9NVE7 773 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 ODF2LQ9ULJ1 636 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 PCDHA5Q9Y5H7 936 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
LINC00339-208ENST00000634934 LOXHD1Q8IVV2 1947 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
LINC00339-208ENST00000634934 IER5Q5VY09 327 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 CNNM4Q6P4Q7 775 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 SLC39A5Q6ZMH5 540 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 CCDC65Q8IXS2 484 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 DAW1Q8N136 415 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 MYCT1Q8N699 235 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 KIFAP3Q92845 792 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 SEZ6LQ9BYH1 1024 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 TRPV6Q9H1D0 765 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 SUCLA2Q9P2R7 463 aaPredicted RBP15.97■□□□□ 0.15
LINC00339-208ENST00000634934 AKT3Q9Y243 479 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 COL4A3BPQ9Y5P4 624 aa15.97■□□□□ 0.15
LINC00339-208ENST00000634934 KAT6AQ92794 2004 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 MAPK7Q13164 816 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 HERC4Q5GLZ8 1057 aaPredicted RBP15.96■□□□□ 0.15
LINC00339-208ENST00000634934 UNC13DQ70J99 1090 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 MTERF4Q7Z6M4 381 aaKnown RBP15.96■□□□□ 0.15
LINC00339-208ENST00000634934 PRPF31Q8WWY3 499 aaKnown RBP15.96■□□□□ 0.15
LINC00339-208ENST00000634934 PSPC1Q8WXF1 523 aaKnown RBP15.96■□□□□ 0.15
LINC00339-208ENST00000634934 DPF3Q92784 378 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 CCDC47Q96A33 483 aaKnown RBP15.96■□□□□ 0.15
LINC00339-208ENST00000634934 PARVGQ9HBI0 331 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 EXOC1Q9NV70 894 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 PDE4DIPQ5VU43 2346 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 ARID2Q68CP9 1835 aa15.96■□□□□ 0.15
LINC00339-208ENST00000634934 SMIM35A0A1B0GVV1 85 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 PVALEFA0A1B0GWK0 134 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 BIN1O00499 593 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 KLRC4O43908 158 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 PQBP1O60828 265 aaKnown RBP15.95■□□□□ 0.14
LINC00339-208ENST00000634934 CCDC192P0DO97 292 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 GAP43P17677 238 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 ARL2P36404 184 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 CDK7P50613 346 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 COASYQ13057 564 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 KMT5BQ4FZB7 885 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 ODR4Q5SWX8 454 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 TAF2Q6P1X5 1199 aa15.95■□□□□ 0.14
LINC00339-208ENST00000634934 SFR1Q86XK3 245 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms