RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZMYM3Q14202 1370 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 MASP2O00187 686 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 SMAD7O15105 426 aaKnown RBP3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 MYO1BO43795 1136 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 MSCO60682 206 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 RPS6KA4O75676 772 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 SCG5P05408 212 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 POLD1P28340 1107 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 C21orf58P58505 322 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 KCNAB2Q13303 367 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 RRP1BQ14684 758 aaKnown RBP3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 PAPD7Q5XG87 772 aaKnown RBP3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 VHLLQ6RSH7 139 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 GAREM2Q75VX8 874 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 JAZF1Q86VZ6 243 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 VRK3Q8IV63 474 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 FAM169BQ8N8A8 192 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 SRPK1Q96SB4 655 aaKnown RBP3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 CRBNQ96SW2 442 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 APBA2Q99767 749 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 CCDC113Q9H0I3 377 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 SLC6A20Q9NP91 592 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 SLC39A2Q9NP94 309 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 MSRB2Q9Y3D2 182 aa3.56□□□□□ -1.84
SMARCB1-208ENST00000634926 SLIT1O75093 1534 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 NLRP1Q9C000 1473 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 ARHGAP23Q9P227 1491 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 SHANK2Q9UPX8 1470 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 SBNO2Q9Y2G9 1366 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 ANKRD62A6NC57 917 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 NUDT3O95989 172 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 ERBB2P04626 1255 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 SNRPB2P08579 225 aaKnown RBP3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 HSD3B2P26439 372 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 LTBRP36941 435 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 NFYCQ13952 458 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 RASA3Q14644 834 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 PPP2R5EQ16537 467 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 ACBD5Q5T8D3 534 aaPredicted RBP3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 POMZP3Q6PJE2 187 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 ZNF662Q6ZS27 426 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 PRIMA1Q86XR5 153 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 PPIL6Q8IXY8 311 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 FAM9AQ8IZU1 332 aaPredicted RBP3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 PPP1R14AQ96A00 147 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 DEPDC7Q96QD5 511 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 SNTG2Q9NY99 539 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 MRPL42Q9Y6G3 142 aaKnown RBP3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 NWD1Q149M9 1564 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 UGGT1Q9NYU2 1555 aa3.55□□□□□ -1.84
SMARCB1-208ENST00000634926 ERVK-7P63135 1459 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 DHX29Q7Z478 1369 aaKnown RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 SPAG9O60271 1321 aaKnown RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ZNF335Q9H4Z2 1342 aaPredicted RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 FAM221BA6H8Z2 402 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 INO80B-WBP1J3KQ70 363 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 NOP56O00567 594 aaKnown RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ENPP3O14638 875 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ARHGAP6O43182 974 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 LMNAP02545 664 aaKnown RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 GCP02774 474 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 CAPNS1P04632 268 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ITGAVP06756 1048 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ENO2P09104 434 aaPredicted RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 COL6A2P12110 1019 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 CASP7P55210 303 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 DDR2Q16832 855 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 SGMS1Q86VZ5 419 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 CELF2-AS1Q8N7Q2 184 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 TMEM145Q8NBT3 493 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 TMEM176AQ96HP8 235 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 INO80BQ9C086 356 aaPredicted RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 PDGFDQ9GZP0 370 aaPredicted RBP3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ACTR10Q9NZ32 417 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 LMTK2Q8IWU2 1503 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 LRRC7Q96NW7 1537 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 LRRC9Q6ZRR7 1453 aa3.54□□□□□ -1.84
SMARCB1-208ENST00000634926 ARHGAP31Q2M1Z3 1444 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 CCNB3Q8WWL7 1395 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 PIK3C2BO00750 1634 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 NKRFO15226 690 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 CLSTN1O94985 981 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 ITGB6P18564 788 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 HOXC12P31275 282 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 RPS19P39019 145 aaKnown RBP3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 SCNN1GP51170 649 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 GFRA1P56159 465 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 RBM10P98175 930 aaKnown RBP3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 FXNQ16595 210 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 ZNF568Q3ZCX4 644 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 CYP4F22Q6NT55 531 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 Q6ZRM9 215 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 MRGPREQ86SM8 312 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 ZNF227Q86WZ6 799 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 ANKRD13AQ8IZ07 590 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 RNPC3Q96LT9 517 aaKnown RBP3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 PRDM13Q9H4Q3 707 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 PARPBPQ9NWS1 579 aa3.53□□□□□ -1.84
SMARCB1-208ENST00000634926 PTGFRNQ9P2B2 879 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms