RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 EDC3Q96F86 508 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF560Q96MR9 790 aa6.86□□□□□ -1.31
SRGAP1-207ENST00000631006 MFSD1Q9H3U5 465 aa6.86□□□□□ -1.31
SRGAP1-207ENST00000631006 KIAA0232Q92628 1395 aa6.86□□□□□ -1.31
SRGAP1-207ENST00000631006 UBE4BO95155 1302 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 C5orf58C9J3I9 102 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 CIAO1O76071 339 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 TJP3O95049 919 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 GPSM2P81274 684 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 NR1H3Q13133 447 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SNAPC2Q13487 334 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 MCPH1Q8NEM0 835 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 PYROXD1Q8WU10 500 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 DYNLL2Q96FJ2 89 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SEPT5Q99719 369 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 LCMT1Q9UIC8 334 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 PIN4Q9Y237 131 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ZBTB1Q9Y2K1 713 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF608Q9ULD9 1512 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 FGAP02671 866 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 CDK8P49336 464 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 COPB1P53618 953 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 RASGRF1Q13972 1273 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ITPRIPL1Q6GPH6 555 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 MAML1Q92585 1016 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 TUBGCP2Q9BSJ2 902 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SIK2Q9H0K1 926 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 RNF146Q9NTX7 359 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SRGAP2O75044 1071 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ADD1P35611 737 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 CENPUQ71F23 418 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 FAM133AQ8N9E0 248 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 KIF12Q96FN5 646 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 DHTKD1Q96HY7 919 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 DACH2Q96NX9 599 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ACAD9Q9H845 621 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 KIAA1586Q9HCI6 787 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 FBXL21Q9UKT6 434 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 TRAF3IP3Q9Y228 551 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SYCE1LA8MT33 242 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 F5H423 210 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 CTSHP09668 335 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 PRELPP51888 382 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 GUCY2DQ02846 1103 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SEPT2Q15019 361 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 KRT39Q6A163 491 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 CLIC6Q96NY7 704 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 NDEL1Q9GZM8 345 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 A8MXQ7 604 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ZBTB7BO15156 539 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SMARCA1P28370 1054 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 FCGRTP55899 365 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 POU5F1BQ06416 359 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ELF2Q15723 593 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 OTUD7AQ8TE49 926 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 P2RX5Q93086 422 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 XPO4Q9C0E2 1151 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SCUBE2Q9NQ36 999 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 TXLNGQ9NUQ3 528 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 GIMAP4Q9NUV9 329 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L20D6RJB6 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 PSMA3P25788 255 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 PDIA3P30101 505 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 LIG3P49916 1009 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 CACNB3P54284 484 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 USP17L24Q0WX57 530 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 SPATA1Q5VX52 437 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 ACAD11Q709F0 780 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 GLYCTKQ8IVS8 523 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 EMILIN3Q9NT22 766 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 TPX2Q9ULW0 747 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 IPPQ9Y573 584 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 HEY1Q9Y5J3 304 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 AATKQ6ZMQ8 1374 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 PALLDQ8WX93 1383 aa6.85□□□□□ -1.31
SRGAP1-207ENST00000631006 WDR91A4D1P6 747 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 C6orf222P0C671 652 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 LCP1P13796 627 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ALDH1A3P47895 512 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 KCNV1Q6PIU1 500 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 VMP1Q96GC9 406 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ECT2Q9H8V3 914 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 INTS9Q9NV88 658 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CACNA2D2Q9NY47 1150 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 TBK1Q9UHD2 729 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 EXOC1LA0A1B0GW35 172 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 KPNA7A9QM74 516 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 BTBD18B2RXH4 712 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 NPHP4O75161 1426 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 SEC24BO95487 1268 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 OAS2P29728 719 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms