RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
CHD2-218ENST00000629346 SRFP11831 508 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 PPM1JQ5JR12 505 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 ST13P5Q8NFI4 369 aaPredicted RBP13.64□□□□□ -0.23
CHD2-218ENST00000629346 HELQQ8TDG4 1101 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 JPH1Q9HDC5 661 aaPredicted RBP13.64□□□□□ -0.23
CHD2-218ENST00000629346 ARHGEF3Q9NR81 526 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 SLC9A2Q9UBY0 812 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
CHD2-218ENST00000629346 MEIS2O14770 477 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 MYBP10242 640 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 CTSAP10619 480 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
CHD2-218ENST00000629346 CRYBB1P53674 252 aaPredicted RBP13.63□□□□□ -0.23
CHD2-218ENST00000629346 PTPN14Q15678 1187 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 ANKRD45Q5TZF3 282 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 FAM43BQ6ZT52 329 aaPredicted RBP13.63□□□□□ -0.23
CHD2-218ENST00000629346 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
CHD2-218ENST00000629346 ECHDC2Q86YB7 292 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 SPATA6Q9NWH7 488 aaPredicted RBP13.63□□□□□ -0.23
CHD2-218ENST00000629346 CACNA1IQ9P0X4 2223 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 SALL3Q9BXA9 1300 aa13.63□□□□□ -0.23
CHD2-218ENST00000629346 SPTLC1O15269 473 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 LAMTOR5O43504 91 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 ZC3H11AO75152 810 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD2-218ENST00000629346 VTNP04004 478 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD2-218ENST00000629346 KLRC2P26717 231 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 NT5C2P49902 561 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 ACTR2P61160 394 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 CSTF1Q05048 431 aaKnown RBP13.62□□□□□ -0.23
CHD2-218ENST00000629346 GIT2Q14161 759 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 GRM4Q14833 912 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 SEC23AQ15436 765 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 PPFIBP1Q86W92 1011 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 PJA1Q8NG27 643 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 KRT23Q9C075 422 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
CHD2-218ENST00000629346 UBIAD1Q9Y5Z9 338 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 IRAK3Q9Y616 596 aa13.62□□□□□ -0.23
CHD2-218ENST00000629346 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
CHD2-218ENST00000629346 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
CHD2-218ENST00000629346 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
CHD2-218ENST00000629346 METTL13Q8N6R0 699 aa13.61□□□□□ -0.23
CHD2-218ENST00000629346 MYADMQ96S97 322 aa13.61□□□□□ -0.23
CHD2-218ENST00000629346 JADE2Q9NQC1 790 aa13.61□□□□□ -0.23
CHD2-218ENST00000629346 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
CHD2-218ENST00000629346 PIK3CDO00329 1044 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 GPR32O75388 356 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 TGM1P22735 817 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 CLCN4P51793 760 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 POLGP54098 1239 aaPredicted RBP13.6□□□□□ -0.23
CHD2-218ENST00000629346 DMWDQ09019 674 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 IMMTQ16891 758 aaKnown RBP13.6□□□□□ -0.23
CHD2-218ENST00000629346 ZNF528Q3MIS6 628 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 C15orf39Q6ZRI6 1047 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 CYB5R4Q7L1T6 521 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 TRMT1LQ7Z2T5 733 aaKnown RBP13.6□□□□□ -0.23
CHD2-218ENST00000629346 BCL7CQ8WUZ0 217 aaPredicted RBP13.6□□□□□ -0.23
CHD2-218ENST00000629346 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 IGSF21Q96ID5 467 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 ZNF668Q96K58 619 aaPredicted RBP13.6□□□□□ -0.23
CHD2-218ENST00000629346 KLHL5Q96PQ7 755 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 SDF4Q9BRK5 362 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 RWDD1Q9H446 243 aaPredicted RBP13.6□□□□□ -0.23
CHD2-218ENST00000629346 PARD6AQ9NPB6 346 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 C2orf16Q68DN1 1984 aa13.6□□□□□ -0.23
CHD2-218ENST00000629346 CCDC195A0A1B0GUA6 201 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 BACH1O14867 736 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 MAFGO15525 162 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 HBP1O60381 514 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
CHD2-218ENST00000629346 WTAPQ15007 396 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 UBE2SQ16763 222 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 EXOC6Q8TAG9 804 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 STAMQ92783 540 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 EMILIN2Q9BXX0 1053 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 MRPL9Q9BYD2 267 aaKnown RBP13.59□□□□□ -0.23
CHD2-218ENST00000629346 BCO2Q9BYV7 579 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 CNNM2Q9H8M5 875 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 WDR6Q9NNW5 1121 aaKnown RBP13.59□□□□□ -0.23
CHD2-218ENST00000629346 KCNH7Q9NS40 1196 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 EPS15L1Q9UBC2 864 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 FBXO4Q9UKT5 387 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 PCDHGA2Q9Y5H1 932 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.59□□□□□ -0.23
CHD2-218ENST00000629346 CLUHO75153 1309 aa13.59□□□□□ -0.23
CHD2-218ENST00000629346 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.58□□□□□ -0.24
CHD2-218ENST00000629346 FGFR4P22455 802 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 PDE1AP54750 535 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 NLRP11P59045 1033 aaKnown RBP13.58□□□□□ -0.24
CHD2-218ENST00000629346 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
CHD2-218ENST00000629346 UBXN2BQ14CS0 331 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms