RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.86
SCARNA4-201ENST00000629045 OR10A2Q9H208 303 aa3.46□□□□□ -1.86
SCARNA4-201ENST00000629045 SMPD4Q9NXE4 827 aa3.46□□□□□ -1.86
SCARNA4-201ENST00000629045 KCMF1Q9P0J7 381 aa3.46□□□□□ -1.86
SCARNA4-201ENST00000629045 SAE1Q9UBE0 346 aaPredicted RBP3.46□□□□□ -1.86
SCARNA4-201ENST00000629045 FOXS1O43638 330 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 PCDH8O95206 1070 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 CLEC2LP0C7M8 214 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 HNRNPLP14866 589 aaKnown RBP eCLIP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 BPIP17213 487 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 NFKB2Q00653 900 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 OCRLQ01968 901 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 HGFACQ04756 655 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 SAFB2Q14151 953 aaKnown RBP eCLIP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 DHCR24Q15392 516 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 TERF2Q15554 542 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 DDB1Q16531 1140 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 DGKDQ16760 1214 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 ATP13A4Q4VNC1 1196 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 CT47A1Q5JQC4 288 aaPredicted RBP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 BROXQ5VW32 411 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 EGFLAMQ63HQ2 1017 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 KIAA1841Q6NSI8 718 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 TIGD7Q6NT04 549 aaPredicted RBP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 ZNF585AQ6P3V2 769 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 LHFPL2Q6ZUX7 228 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 USP30Q70CQ3 517 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 KANSL1Q7Z3B3 1105 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 C11orf74Q86VG3 221 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 TAX1BP1Q86VP1 789 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 PASD1Q8IV76 773 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 ZZZ3Q8IYH5 903 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 ZNF610Q8N9Z0 462 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 RPGRQ92834 1020 aaKnown RBP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 FERMT2Q96AC1 680 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 DYDC2Q96IM9 177 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 OR14A2Q96R54 314 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 PLA2G12BQ9BX93 195 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 C12orf65Q9H3J6 166 aaKnown RBP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 IFT22Q9H7X7 185 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 SEC61A2Q9H9S3 476 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 CD248Q9HCU0 757 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 POLR3BQ9NW08 1133 aaPredicted RBP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 DENND2AQ9ULE3 1009 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 PPP2R3BQ9Y5P8 575 aa3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 RBM8AQ9Y5S9 174 aaKnown RBP3.45□□□□□ -1.86
SCARNA4-201ENST00000629045 PATE3B3GLJ2 98 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 OPHN1O60890 802 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CR2P20023 1033 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CNGA1P29973 690 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 SOX5P35711 763 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 PHC1P78364 1004 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 ADAM17P78536 824 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 ADCY1Q08828 1119 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 DUSP8Q13202 625 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 NFYCQ13952 458 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 LRRC32Q14392 662 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 SPATS1Q496A3 300 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 KLHDC10Q6PID8 442 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 ESPNLQ6ZVH7 1005 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 BMP8AQ7Z5Y6 402 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CXorf67Q86X51 503 aaPredicted RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 PALM2Q8IXS6 379 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 FUKQ8N0W3 1084 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 AFAP1L2Q8N4X5 818 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CLRN3Q8NCR9 226 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 DNERQ8NFT8 737 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 Q8TCH9 128 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CHAC2Q8WUX2 184 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 NKD2Q969F2 451 aaPredicted RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 WWC2-AS2Q96NR7 200 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 SAMD11Q96NU1 681 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 NOL10Q9BSC4 688 aaKnown RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 PITHD1Q9GZP4 211 aaPredicted RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 HAPLN2Q9GZV7 340 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 PRDM12Q9H4Q4 367 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CAAP1Q9H8G2 361 aa3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 PUF60Q9UHX1 559 aaKnown RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 ZFR2Q9UPR6 939 aaKnown RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 CTDP1Q9Y5B0 961 aaPredicted RBP3.44□□□□□ -1.86
SCARNA4-201ENST00000629045 A0A0A6YYJ9 748 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 A0A0A6YYK5 440 aaPredicted RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 ST20-MTHFSA0A0A6YYL1 179 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 C2orf78A6NCI8 922 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 SLC26A4O43511 780 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 ZNF20P17024 532 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 LSP1P33241 339 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 MAGEA10P43363 369 aaPredicted RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 BCAR1P56945 870 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 TMPRSS15P98073 1019 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 ATP2C1P98194 919 aaPredicted RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 TCIRG1Q13488 830 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 STAT4Q14765 748 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 CDSNQ15517 529 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 GPR158Q5T848 1215 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 CCDC62Q6P9F0 684 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 DDX46Q7L014 1031 aaKnown RBP3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 GPR135Q8IZ08 494 aa3.43□□□□□ -1.86
SCARNA4-201ENST00000629045 SHCBP1Q8NEM2 672 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms