RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 RIOX1Q9H6W3 641 aa4.9□□□□□ -1.63
VBP1-204ENST00000625964 SMURF1Q9HCE7 757 aa4.9□□□□□ -1.63
VBP1-204ENST00000625964 ATP23Q9Y6H3 246 aa4.9□□□□□ -1.63
VBP1-204ENST00000625964 ACOT7O00154 380 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 OPA1O60313 960 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 PTPN1P18031 435 aaKnown RBP4.89□□□□□ -1.63
VBP1-204ENST00000625964 GJA4P35212 333 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 IGFALSP35858 605 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 PABPC4Q13310 644 aaKnown RBP eCLIP4.89□□□□□ -1.632e-8■■□□□ 14
VBP1-204ENST00000625964 C21orf62-AS1Q17RA5 79 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 TRIM68Q6AZZ1 485 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 ABHD17CQ6PCB6 329 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 C16orf86Q6ZW13 317 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 BHLHA9Q7RTU4 235 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 NOP9Q86U38 636 aaKnown RBP4.89□□□□□ -1.63
VBP1-204ENST00000625964 SYNPOQ8N3V7 929 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 NRDE2Q9H7Z3 1164 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 SLC39A2Q9NP94 309 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 ZNHIT2Q9UHR6 403 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 PACSIN3Q9UKS6 424 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 CD2APQ9Y5K6 639 aa4.89□□□□□ -1.63
VBP1-204ENST00000625964 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
VBP1-204ENST00000625964 PRAMEF25A6NGN4 478 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 FAM90A27PA6NNH2 459 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 B4E1Z4 1266 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 TRAF5O00463 557 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 SLC26A4O43511 780 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 DNAJC8O75937 253 aaPredicted RBP4.88□□□□□ -1.63
VBP1-204ENST00000625964 ASLP04424 464 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 ERBB2P04626 1255 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 CDK4P11802 303 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 LACTBP83111 547 aaPredicted RBP4.88□□□□□ -1.63
VBP1-204ENST00000625964 SLC25A3Q00325 362 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 ZNF460Q14592 562 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 TKFCQ3LXA3 575 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 TMEM177Q53S58 311 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 LARP4Q71RC2 724 aaKnown RBP eCLIP4.88□□□□□ -1.63
VBP1-204ENST00000625964 MRGPREQ86SM8 312 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 DDX53Q86TM3 631 aaKnown RBP4.88□□□□□ -1.63
VBP1-204ENST00000625964 SHCBP1Q8NEM2 672 aa4.88□□□□□ -1.63
VBP1-204ENST00000625964 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 SCDO00767 359 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 NPTXRO95502 500 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 KCNA6P17658 529 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 SDSP20132 328 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 MEOX1P50221 254 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 KCNQ1P51787 676 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 CNGB1Q14028 1251 aaPredicted RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 PCOLCEQ15113 449 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 COLEC12Q5KU26 742 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 ZCCHC8Q6NZY4 707 aaKnown RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 OVCH1Q7RTY7 1134 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 C2orf69Q8N8R5 385 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 NTN5Q8WTR8 489 aaPredicted RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 KIAA1683Q9H0B3 1180 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 SAMD15Q9P1V8 674 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 ZAR1LA6NP61 321 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 M0R2C6 588 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 RFPL3O75679 317 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 GLRX3O76003 335 aaKnown RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 FLT3P36888 993 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 HGFACQ04756 655 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 MBNL2Q5VZF2 373 aaKnown RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 FSTL4Q6MZW2 842 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 GPR150Q8NGU9 434 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 LENG9Q96B70 501 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
VBP1-204ENST00000625964 MAGEC2Q9UBF1 373 aaPredicted RBP4.87□□□□□ -1.63
VBP1-204ENST00000625964 SLC12A8A0AV02 714 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 CLASP2O75122 1294 aaKnown RBP4.86□□□□□ -1.63
VBP1-204ENST00000625964 HIP1RO75146 1068 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 PPFIA4O75335 1185 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 RPS6KA4O75676 772 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 KRT37O76014 449 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 JMJD7P0C870 316 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 MRE11P49959 708 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 STILQ15468 1287 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 PIK3R6Q5UE93 754 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 NOSTRINQ8IVI9 506 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 MIEF2Q96C03 454 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 WNK4Q96J92 1243 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 FEZ1Q99689 392 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 GALNT8Q9NY28 637 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 TBX22Q9Y458 520 aa4.86□□□□□ -1.63
VBP1-204ENST00000625964 C4BPAP04003 597 aaKnown RBP4.85□□□□□ -1.63
VBP1-204ENST00000625964 IL13RA1P78552 427 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 IRF9Q00978 393 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 SEC23AQ15436 765 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 UBE2R2Q712K3 238 aaPredicted RBP4.85□□□□□ -1.63
VBP1-204ENST00000625964 FILIP1Q7Z7B0 1213 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 ADGRG3Q86Y34 549 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 NIM1KQ8IY84 436 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 CHST14Q8NCH0 376 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 NINJ1Q92982 152 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 TMEM176AQ96HP8 235 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 CABP5Q9NP86 173 aa4.85□□□□□ -1.63
VBP1-204ENST00000625964 TMA7Q9Y2S6 64 aaKnown RBP4.85□□□□□ -1.63
VBP1-204ENST00000625964 MAN2A2P49641 1150 aa4.84□□□□□ -1.63
VBP1-204ENST00000625964 NEK4P51957 841 aa4.84□□□□□ -1.63
VBP1-204ENST00000625964 TOB2Q14106 344 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms