RNA–Protein interactions for RNA: ENST00000624693.1

C11orf49-223, Transcript of chromosome 11 open reading frame 49, human

Gene C11orf49, Length 2,141 nt, Biotype TEC.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-223	ENST00000624693	TMC3	Q7Z5M5	1100 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	KCNMB3	Q9NPA1	279 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	NYAP2	Q9P242	653 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	PVALEF	A0A1B0GWK0	134 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	PGRMC1	O00264	195 aa	Known RBP	13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	SART1	O43290	800 aa	Known RBP	13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	ATP2C2	O75185	946 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	GDF11	O95390	407 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	CLTA	P09496	248 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	SNHG28	P0DPA3	235 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	STK4	Q13043	487 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	BLMH	Q13867	455 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	MICALL2	Q8IY33	904 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	THOC1	Q96FV9	657 aa	Known RBP	13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	IFT74	Q96LB3	600 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	SLC39A2	Q9NP94	309 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	ETAA1	Q9NY74	926 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	CNOT7	Q9UIV1	285 aa	Known RBP	13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693	MYH10	P35580	1976 aa		13.85	□□□□□ -0.19
C11orf49-223	ENST00000624693		F8VZ95	297 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	ABLIM1	O14639	778 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	EPHB6	O15197	1021 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	AHCYL1	O43865	530 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	ECM2	O94769	699 aa	Predicted RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	KIF4A	O95239	1232 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	FTCD	O95954	541 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	EEF2	P13639	858 aa	Known RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	NQO1	P15559	274 aa	Known RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	ASIC1	P78348	528 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	TRADD	Q15628	312 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	SLC35G1	Q2M3R5	365 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	PNMA8A	Q86V59	439 aa	Predicted RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	GUF1	Q8N442	669 aa	Known RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	OR2W6P	Q8NHA6	318 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	MKL1	Q969V6	931 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	TMEM39B	Q9GZU3	492 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	RIC8A	Q9NPQ8	531 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	PCDHA4	Q9UN74	947 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	CCDC169	A6NNP5	214 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	TULP1	O00294	542 aa	Predicted RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	PPFIA2	O75334	1257 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	FLOT1	O75955	427 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	FES	P07332	822 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	NUDT17	P0C025	328 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	LMNB1	P20700	586 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	KLRC1	P26715	233 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	SSR1	P43307	286 aa	Known RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	MMP13	P45452	471 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	TRAF1	Q13077	416 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	TNFAIP1	Q13829	316 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	STMN4	Q9H169	189 aa	Predicted RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	SEMA6B	Q9H3T3	888 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	KIF9	Q9HAQ2	790 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	SLC5A4	Q9NY91	659 aa		13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	SEC63	Q9UGP8	760 aa	Known RBP	13.84	□□□□□ -0.19
C11orf49-223	ENST00000624693	DICER1	Q9UPY3	1922 aa	Known RBP	13.83	□□□□□ -0.19
C11orf49-223	ENST00000624693	CCDC194	A0A1B0GVG4	234 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	KCNK3	O14649	394 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	TBC1D12	O60347	775 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	SNUPN	O95149	360 aa	Known RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	GH2	P01242	217 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	VEGFA	P15692	232 aa	Predicted RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	PECAM1	P16284	738 aa	Predicted RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	ANXA13	P27216	316 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	ZNF543	Q08ER8	600 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	GPATCH4	Q5T3I0	446 aa	Known RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	CABP7	Q86V35	215 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	DAGLB	Q8NCG7	672 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	AGAP11	Q8TF27	550 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	TSG101	Q99816	390 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	CPVL	Q9H3G5	476 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	CPSF2	Q9P2I0	782 aa	Known RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	UTP11	Q9Y3A2	253 aa	Known RBP	13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	ZNF541	Q9H0D2	1346 aa		13.83	□□□□□ -0.2
C11orf49-223	ENST00000624693	WFS1	O76024	890 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	MME	P08473	750 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	DHX9	Q08211	1270 aa	Known RBP	13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	PSMD2	Q13200	908 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	CLUL1	Q15846	466 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	HEATR3	Q7Z4Q2	680 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	RASGEF1C	Q8N431	466 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	LRRC27	Q9C0I9	530 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	UBA5	Q9GZZ9	404 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	RAB17	Q9H0T7	212 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	RIOX1	Q9H6W3	641 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	VAT1L	Q9HCJ6	419 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	GPCPD1	Q9NPB8	672 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	BARHL2	Q9NY43	387 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	AIPL1	Q9NZN9	384 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693		A6NHS1	94 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	EGFR	P00533	1210 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	PLCG1	P19174	1290 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	PDE6C	P51160	858 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	INHBE	P58166	350 aa		13.82	□□□□□ -0.2
C11orf49-223	ENST00000624693	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms