RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 ACSL3O95573 720 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 ATP2A2P16615 1042 aaKnown RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 CASP4P49662 377 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 MAGOHP61326 146 aaKnown RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 FBXL5Q9UKA1 691 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 PRDM4Q9UKN5 801 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 NAB2Q15742 525 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 GPR162Q16538 588 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 METTL13Q8N6R0 699 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 OR2W6PQ8NHA6 318 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 GRID2IPA4D2P6 1211 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 RAD51CO43502 376 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 ALDH3A1P30838 453 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 STRIP1Q5VSL9 837 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 HHATQ5VTY9 493 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 EEPD1Q7L9B9 569 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 SCFD1Q8WVM8 642 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 RFFLQ8WZ73 363 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 MED15Q96RN5 788 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 ZNF277Q9NRM2 450 aaPredicted RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 RAB20Q9NX57 234 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 TTI1O43156 1089 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 QARSP47897 775 aaKnown RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 PSMC6P62333 389 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 GPC5P78333 572 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 CCDC13Q8IYE1 715 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 SLC7A3Q8WY07 619 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 SEL1LQ9UBV2 794 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 CHORDC1Q9UHD1 332 aaPredicted RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 ANAPC7Q9UJX3 599 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 STK38LQ9Y2H1 464 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 POC1B-GALNT4F8VUJ3 575 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 P4HBP07237 508 aaKnown RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 BRDTQ58F21 947 aaPredicted RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 KLHDC7AQ5VTJ3 777 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 RNF207Q6ZRF8 634 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 SEPT14Q6ZU15 432 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 IRF2BP1Q8IU81 584 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 MMGT1Q8N4V1 131 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 RUNDC3BQ96NL0 473 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 ZIM3Q96PE6 472 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 CNOT8Q9UFF9 292 aaKnown RBP13.85□□□□□ -0.19
MSH6-215ENST00000622629 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
MSH6-215ENST00000622629 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 DDTLA6NHG4 134 aaPredicted RBP13.84□□□□□ -0.19
MSH6-215ENST00000622629 RASGRF2O14827 1237 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 MSH4O15457 936 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 CLTAP09496 248 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 FMO5P49326 533 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 MXRA7P84157 204 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 WDR59Q6PJI9 974 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 SRLQ86TD4 932 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 TTLL6Q8N841 843 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 CCDC89Q8N998 374 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 HEMGNQ9BXL5 484 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 HAUS6Q7Z4H7 955 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 CYP2W1Q8TAV3 490 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 VTI1AQ96AJ9 217 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 RUSC1Q9BVN2 902 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 RAB21Q9UL25 225 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 PITPNM2Q9BZ72 1349 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 DENND3A2RUS2 1198 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 EPHB6O15197 1021 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 HSPA6P17066 643 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 MAGEA9P43362 315 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 RWDD2BP57060 319 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 BPIFB4P59827 614 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
MSH6-215ENST00000622629 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 GRK7Q8WTQ7 553 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 NAGPAQ9UK23 515 aa13.84□□□□□ -0.19
MSH6-215ENST00000622629 RCCD1A6NED2 376 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 TBX3O15119 743 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 CD58P19256 250 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 ECE1P42892 770 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 EPHA7Q15375 998 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 SYT2Q8N9I0 419 aaPredicted RBP13.83□□□□□ -0.19
MSH6-215ENST00000622629 ATP6V1G3Q96LB4 118 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 TRIM51Q9BSJ1 452 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.19
MSH6-215ENST00000622629 IRAK1P51617 712 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 ZNF394Q53GI3 561 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 TADA2BQ86TJ2 420 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 PASD1Q8IV76 773 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 CCDC197Q8NCU1 140 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 ZNF507Q8TCN5 953 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms