RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MTFR1Q15390 333 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 CCSAPQ6IQ19 270 aaPredicted RBP19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 KLHL10Q6JEL2 608 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 FAM178BQ8IXR5 827 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 GLIS3Q8NEA6 775 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 PPP1R13LQ8WUF5 828 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 FGFBP2Q9BYJ0 223 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 CENPFP49454 3210 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 TRIP12Q14669 1992 aaPredicted RBP19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 RRN3P2A6NIE6 340 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 GAS2O43903 313 aaKnown RBP19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 CCL5P13501 91 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 KLRC1P26715 233 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 PKN2Q16513 984 aaKnown RBP19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 ADSSL1Q8N142 457 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 LRRC71Q8N4P6 559 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 FAM200AQ8TCP9 573 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 ZBTB10Q96DT7 871 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 RBSNQ9H1K0 784 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 SETD4Q9NVD3 440 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 IGKV6-21A0A0C4DH24 114 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 MAGEB2O15479 319 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 PEX3P56589 373 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 DMP1Q13316 513 aaPredicted RBP19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 EFCAB12Q6NXP0 572 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 METTL13Q8N6R0 699 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 C7orf31Q8N865 590 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 RETREG2Q8NC44 543 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 LMBR1Q8WVP7 490 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 TCP11Q8WWU5 503 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 IFT74Q96LB3 600 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 RNF208Q9H0X6 261 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 C17orf75Q9HAS0 396 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 CBX8Q9HC52 389 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 PAK6Q9NQU5 681 aaPredicted RBP19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 CTNND2Q9UQB3 1225 aa19.68■□□□□ 0.74
PTCHD3-202ENST00000622555 NRCAMQ92823 1304 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 GCNT3O95395 438 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 NMT1P30419 496 aaKnown RBP19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 ARL2P36404 184 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 PPP1R2P41236 205 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 CASP5P51878 434 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 RTP1P59025 263 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 COBLL1Q53SF7 1204 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 IER5Q5VY09 327 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 MTHFD1LQ6UB35 978 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 MYOCDQ8IZQ8 938 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 ARRDC4Q8NCT1 418 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 BSNDQ8WZ55 320 aa19.67■□□□□ 0.74
PTCHD3-202ENST00000622555 CCDC169A6NNP5 214 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 K7ENM7 598 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 PSMA7O14818 248 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 MYBP10242 640 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 DNM2P50570 870 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 CLCN3P51790 818 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 SMTNP53814 917 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 DRP2Q13474 957 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 CT47A1Q5JQC4 288 aaPredicted RBP19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 MARCH8Q5T0T0 291 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 GUF1Q8N442 669 aaKnown RBP19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 ASAP3Q8TDY4 903 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 NELFBQ8WX92 580 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 DEFB118Q96PH6 123 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 FIZ1Q96SL8 496 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 BPIFA3Q9BQP9 254 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 HDAC6Q9UBN7 1215 aa19.66■□□□□ 0.74
PTCHD3-202ENST00000622555 ERCC5P28715 1186 aaPredicted RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 NPTX2P47972 431 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 ACLYP53396 1101 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 PAK1Q13153 545 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 MKRN4PQ13434 485 aaPredicted RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 NBPF20Q3BBV1 942 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 STXBP4Q6ZWJ1 553 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 ZNF720Q7Z2F6 126 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 LUZP1Q86V48 1076 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 AOPEPQ8N6M6 819 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 PSPC1Q8WXF1 523 aaKnown RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 DHTKD1Q96HY7 919 aaPredicted RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 TSEN34Q9BSV6 310 aaKnown RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 KMT5AQ9NQR1 393 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 SUCLA2Q9P2R7 463 aaPredicted RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 C17orf102A2RUQ5 167 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 MOXD2PA6NHM9 499 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 SLC16A4O15374 487 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 CABYRO75952 493 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 KIF20AO95235 890 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 MAPTP10636 758 aaKnown RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 GLRA2P23416 452 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 STX17P56962 302 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 PPP2R5AQ15172 486 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 NFRKBQ6P4R8 1299 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 EPM2AIP1Q7L775 607 aaPredicted RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 SLC17A8Q8NDX2 589 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 SCFD1Q8WVM8 642 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 SPIRE2Q8WWL2 714 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 PRPF31Q8WWY3 499 aaKnown RBP19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 VTI1AQ96AJ9 217 aa19.65■□□□□ 0.74
PTCHD3-202ENST00000622555 BECN2A8MW95 431 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 KBTBD13C9JR72 458 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms