RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TMEM35BQ8NCS4 154 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 URGCPQ8TCY9 931 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 SKA2Q8WVK7 121 aaPredicted RBP9.96□□□□□ -0.82
GGA3-223ENST00000621870 TRIM9Q9C026 710 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 TMEM60Q9H2L4 133 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 SAMD15Q9P1V8 674 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 ARHGAP23Q9P227 1491 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 NPHP3-ACAD11A0A0J9YXS1 232 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 GOLGA6CA6NDK9 693 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 GOLGA6BA6NDN3 693 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 GOLGA6DP0CG33 693 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 ATXN8OSP0DMR3 200 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 IL1R1P14778 569 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 ACOT2P49753 483 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 TSPY1Q01534 308 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 PRKCEQ02156 737 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 CDR2LQ86X02 465 aaPredicted RBP9.96□□□□□ -0.82
GGA3-223ENST00000621870 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 OPTNQ96CV9 577 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 GOLGA6AQ9NYA3 693 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 PFASO15067 1338 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 CNTNAP5Q8WYK1 1306 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 CPB1P15086 417 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 VCAM1P19320 739 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 EFNA5P52803 228 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 TSTA3Q13630 321 aaPredicted RBP9.95□□□□□ -0.82
GGA3-223ENST00000621870 DUOXA2Q1HG44 320 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 DACT2Q5SW24 774 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 DNAAF3Q8N9W5 541 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 LBHD1Q9BQE6 289 aaPredicted RBP9.95□□□□□ -0.82
GGA3-223ENST00000621870 MXRA8Q9BRK3 442 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ZMYND12Q9H0C1 365 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 PIDD1Q9HB75 910 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 SLIT1O75093 1534 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 SOWAHDA6NJG2 315 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 SGK1O00141 431 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 CIITAP33076 1130 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 KIF11P52732 1056 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 PPP2R5EQ16537 467 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ERCC6LQ2NKX8 1250 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ELMSAN1Q6PJG2 1045 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 RUFY4Q6ZNE9 571 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 TAOK1Q7L7X3 1001 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 FAM83AQ86UY5 434 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 CCSER1Q9C0I3 900 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 MTIF3Q9H2K0 278 aaKnown RBP9.95□□□□□ -0.82
GGA3-223ENST00000621870 PYCARDQ9ULZ3 195 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ATP8B3O60423 1300 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 USP32Q8NFA0 1604 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 PXDNLA1KZ92 1463 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 A8MXQ7 604 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 KRT1P04264 644 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 KCNJ6P48051 423 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 HHATQ5VTY9 493 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 DENND2CQ68D51 928 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ZNF746Q6NUN9 644 aaPredicted RBP9.95□□□□□ -0.82
GGA3-223ENST00000621870 KIF2CQ99661 725 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 C11orf70Q9BRQ4 267 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
GGA3-223ENST00000621870 ANAPC4Q9UJX5 808 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 TMX2Q9Y320 296 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
GGA3-223ENST00000621870 ACTN1P12814 892 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 FCGRTP55899 365 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 RWDD4Q6NW29 188 aaKnown RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 TEX2Q8IWB9 1127 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 GPC2Q8N158 579 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 PROM2Q8N271 834 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 GTF3C2Q8WUA4 911 aaPredicted RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 TSC1Q92574 1164 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 RPGRIP1Q96KN7 1286 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 NDUFA10O95299 355 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 ICAM1P05362 532 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 FDPSP14324 419 aaKnown RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
GGA3-223ENST00000621870 NAALADL2Q58DX5 795 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 KRT39Q6A163 491 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 VSTM4Q8IW00 320 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 KCTD6Q8NC69 237 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 MYRIPQ8NFW9 859 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 ATP2A3Q93084 1043 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 ACAP3Q96P50 834 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 NHEJ1Q9H9Q4 299 aaPredicted RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 TUFT1Q9NNX1 390 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 DDX4Q9NQI0 724 aaKnown RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 ERAP1Q9NZ08 941 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 FBXO2Q9UK22 296 aaPredicted RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 FAM205AQ6ZU69 1335 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 BUB1BO60566 1050 aaPredicted RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 SERPING1P05155 500 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 ATF2P15336 505 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 GCLCP48506 637 aaPredicted RBP9.94□□□□□ -0.82
GGA3-223ENST00000621870 GUCY2DQ02846 1103 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 IER5Q5VY09 327 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 GRK7Q8WTQ7 553 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 DPF2Q92785 391 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 CEP63Q96MT8 703 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 KATNAL1Q9BW62 490 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms