RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 NME8Q8N427 588 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-210ENST00000621245 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 ADAMTS10Q9H324 1103 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 RGS18Q9NS28 235 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 TBC1D22BQ9NU19 505 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 TBKBP1A7MCY6 615 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 WDR64B1ANS9 1081 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 SLC37A4O43826 429 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
CPNE3-210ENST00000621245 REC8O95072 547 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 STBD1O95210 358 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 OATP04181 439 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 RPLP2P05387 115 aaKnown RBP12.93□□□□□ -0.34
CPNE3-210ENST00000621245 PBX3P40426 434 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 CRYBB1P53674 252 aaPredicted RBP12.93□□□□□ -0.34
CPNE3-210ENST00000621245 NLRP5P59047 1200 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 AKAP17AQ02040 695 aaKnown RBP12.93□□□□□ -0.34
CPNE3-210ENST00000621245 IER5LQ5T953 404 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 B3GNT9Q6UX72 402 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 CCDC148Q8NFR7 591 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 VN1R2Q8NFZ6 395 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 KCNJ14Q9UNX9 436 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 RWDD3Q9Y3V2 267 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 SAMM50Q9Y512 469 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 TECTAO75443 2155 aa12.93□□□□□ -0.34
CPNE3-210ENST00000621245 DENND3A2RUS2 1198 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 MBTPS2O43462 519 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 GAS7O60861 476 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 PSMD10O75832 226 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 PSMA5P28066 241 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
CPNE3-210ENST00000621245 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
CPNE3-210ENST00000621245 SCRN1Q12765 414 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
CPNE3-210ENST00000621245 EFCAB12Q6NXP0 572 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 LRRC55Q6ZSA7 311 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 RBM23Q86U06 439 aaKnown RBP12.92□□□□□ -0.34
CPNE3-210ENST00000621245 ETNPPLQ8TBG4 499 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 TNPO1Q92973 898 aaKnown RBP12.92□□□□□ -0.34
CPNE3-210ENST00000621245 P2RX5Q93086 422 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 CWH43Q9H720 699 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
CPNE3-210ENST00000621245 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 PCDHB7Q9Y5E2 793 aa12.92□□□□□ -0.34
CPNE3-210ENST00000621245 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 ATF7P17544 494 aaPredicted RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 NRIP1P48552 1158 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 GPC3P51654 580 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 CLCN6P51797 869 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 ERVFC1P60507 584 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 ADAM15Q13444 863 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 TARBP2Q15633 366 aaKnown RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 Q4G0T1 1027 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 EARS2Q5JPH6 523 aaKnown RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 TMEM31Q5JXX7 168 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 BLIDQ8IZY5 108 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 COLGALT1Q8NBJ5 622 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 MSLNLQ96KJ4 702 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 MBOAT7Q96N66 472 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 TEKT3Q9BXF9 490 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 SH3GLB2Q9NR46 395 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 TYW1Q9NV66 732 aaKnown RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 BARX2Q9UMQ3 279 aaPredicted RBP12.91□□□□□ -0.34
CPNE3-210ENST00000621245 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
CPNE3-210ENST00000621245 CYP3A7-CYP3A51PA0A087WV96 503 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 EML1O00423 815 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 PER2O15055 1255 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 DEXIO95424 95 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 LARGE1O95461 756 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 CTDNEP1O95476 244 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 CYP3A7P24462 503 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 USP11P51784 963 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 FAM189BP81408 668 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 INF2Q27J81 1249 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 MTERF2Q49AM1 385 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 SLC24A5Q71RS6 500 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms