RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 MYH14Q7Z406 1995 aaKnown RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 GOLGA8KD6RF30 607 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 ONECUT3O60422 494 aaPredicted RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 POTEJP0CG39 1038 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 GCLMP48507 274 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 PAK2Q13177 524 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 PPP1R7Q15435 360 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 ZBTB33Q86T24 672 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 AGBL3Q8NEM8 1001 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 FHDC1Q9C0D6 1143 aaPredicted RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 UBE2TQ9NPD8 197 aaPredicted RBP9.83□□□□□ -0.84
GGA3-222ENST00000621217 AMFRQ9UKV5 643 aa9.83□□□□□ -0.84
GGA3-222ENST00000621217 LUC7L3O95232 432 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 RPSAP08865 295 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 CASP4P49662 377 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 SH3BGRP55822 239 aaPredicted RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 DMP1Q13316 513 aaPredicted RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 SLC35G1Q2M3R5 365 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 SRLQ86TD4 932 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 IRF2BP1Q8IU81 584 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 GLYCTKQ8IVS8 523 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 NLRP4Q96MN2 994 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 APOL6Q9BWW8 343 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 PACSIN1Q9BY11 444 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 DDX47Q9H0S4 455 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 IKZF4Q9H2S9 585 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 KMT5AQ9NQR1 393 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 BLOC1S4Q9NUP1 217 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 ARHGAP20Q9P2F6 1191 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 ITIH6Q6UXX5 1313 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 RCCD1A6NED2 376 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 ADM5C9JUS6 153 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 KLRC4O43908 158 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 CD19P15391 556 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 CTNNA2P26232 953 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 CETN2P41208 172 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 MXRA7P84157 204 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 HDLBPQ00341 1268 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 PSMD2Q13200 908 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 C9orf131Q5VYM1 1079 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 LMBRD2Q68DH5 695 aaPredicted RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 SH3BP5LQ7L8J4 393 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 RNF169Q8NCN4 708 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 SPATA4Q8NEY3 305 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 SAAL1Q96ER3 474 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 GUCY2CP25092 1073 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 PSMC2P35998 433 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 PRELPP51888 382 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 MYL7Q01449 175 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 ADCY1Q08828 1119 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 KRT71Q3SY84 523 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 SH2D4BQ5SQS7 431 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 PDXDC1Q6P996 788 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 ELOA2Q8IYF1 753 aaPredicted RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 CAMKK2Q96RR4 588 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 TACO1Q9BSH4 297 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 KIFC3Q9BVG8 833 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 NUCKS1Q9H1E3 243 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 KCND1Q9NSA2 647 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 LRRD1A4D1F6 860 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 H3BQF6 201 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 MSH4O15457 936 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 KLRC1P26715 233 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 CTNNA1P35221 906 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 USP11P51784 963 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 PDIA5Q14554 519 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 COG2Q14746 738 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 GSTA5Q7RTV2 222 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 SLC7A3Q8WY07 619 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 LRRC45Q96CN5 670 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 FUT8Q9BYC5 575 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
GGA3-222ENST00000621217 USP20Q9Y2K6 914 aa9.82□□□□□ -0.84
GGA3-222ENST00000621217 E2F5Q15329 346 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 INTS8Q75QN2 995 aaKnown RBP9.81□□□□□ -0.84
GGA3-222ENST00000621217 USP37Q86T82 979 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 ANKZF1Q9H8Y5 726 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 SUFUQ9UMX1 484 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 ABCC6O95255 1503 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 A0A087X0T9 212 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 FAM86B1E9PN63 330 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 NKRFO15226 690 aaKnown RBP eCLIP9.81□□□□□ -0.84
GGA3-222ENST00000621217 HIP1RO75146 1068 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 FAM86B2P0C5J1 330 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 FAM228BP0C875 321 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 CYP11B2P19099 503 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 KCNA1Q09470 495 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 ECM1Q16610 540 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 MAP1SQ66K74 1059 aaPredicted RBP9.81□□□□□ -0.84
GGA3-222ENST00000621217 CAPN12Q6ZSI9 719 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 SH2D3CQ8N5H7 860 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 CCDC26Q8TAB7 109 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 HDAC7Q8WUI4 952 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 FAM20AQ96MK3 541 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 FGFBP2Q9BYJ0 223 aa9.81□□□□□ -0.84
GGA3-222ENST00000621217 DNAJC18Q9H819 358 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms