RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 SLC29A2Q14542 456 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 COBLL1Q53SF7 1204 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 ODR4Q5SWX8 454 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 MICALCLQ6ZW33 695 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 TMC3Q7Z5M5 1100 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 PNMA8AQ86V59 439 aaPredicted RBP17.4■□□□□ 0.38
DKC1-213ENST00000620277 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 MRRFQ96E11 262 aaKnown RBP17.4■□□□□ 0.38
DKC1-213ENST00000620277 SEMA4AQ9H3S1 761 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 SLC40A1Q9NP59 571 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 SIX2Q9NPC8 291 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 UBE2TQ9NPD8 197 aaPredicted RBP17.4■□□□□ 0.38
DKC1-213ENST00000620277 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 RDXP35241 583 aaKnown RBP17.4■□□□□ 0.38
DKC1-213ENST00000620277 JAG1P78504 1218 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 ERMNQ8TAM6 284 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 EPS8L3Q8TE67 593 aaKnown RBP17.4■□□□□ 0.38
DKC1-213ENST00000620277 ELAC2Q9BQ52 826 aaKnown RBP17.4■□□□□ 0.38
DKC1-213ENST00000620277 EDEM3Q9BZQ6 932 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 PLCB1Q9NQ66 1216 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 BAIAP2L1Q9UHR4 511 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 COG5Q9UP83 839 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 MYH7BA7E2Y1 1941 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 H0YGN5 161 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 GJC1P36383 396 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 GABPAQ06546 454 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 FBXO11Q86XK2 927 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 PBKQ96KB5 322 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 PWWP2AQ96N64 755 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 KLC4Q9NSK0 619 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 DAAM1Q9Y4D1 1078 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 NFS1Q9Y697 457 aa17.39■□□□□ 0.38
DKC1-213ENST00000620277 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 ECE1P42892 770 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 FNTAP49354 379 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 GPATCH4Q5T3I0 446 aaKnown RBP17.39■□□□□ 0.37
DKC1-213ENST00000620277 MSL1Q68DK7 614 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 ANKRD42Q8N9B4 389 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 TCP11Q8WWU5 503 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 SYN2Q92777 582 aaPredicted RBP17.39■□□□□ 0.37
DKC1-213ENST00000620277 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.37
DKC1-213ENST00000620277 KCNMB3Q9NPA1 279 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 ACSL3O95573 720 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 GH2P01242 217 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 CHN1P15882 459 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 IFI16Q16666 785 aaKnown RBP17.39■□□□□ 0.37
DKC1-213ENST00000620277 RINT1Q6NUQ1 792 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 TBK1Q9UHD2 729 aa17.39■□□□□ 0.37
DKC1-213ENST00000620277 CCDC88AQ3V6T2 1871 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 CLTAP09496 248 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
DKC1-213ENST00000620277 TNIP1Q15025 636 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 PPP1R7Q15435 360 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 ZKSCAN8Q15776 578 aaPredicted RBP17.38■□□□□ 0.37
DKC1-213ENST00000620277 SYT2Q8N9I0 419 aaPredicted RBP17.38■□□□□ 0.37
DKC1-213ENST00000620277 ABCB11O95342 1321 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 F8VZ95 297 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 IL1R1P14778 569 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 CREB1P16220 341 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 MAP2K2P36507 400 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 FAM182AQ5T1J6 154 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 SLC30A5Q8TAD4 765 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 PRMT1Q99873 361 aaKnown RBP17.38■□□□□ 0.37
DKC1-213ENST00000620277 TMEM59LQ9UK28 342 aa17.38■□□□□ 0.37
DKC1-213ENST00000620277 ABCA3Q99758 1704 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 FTLP02792 175 aaPredicted RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 SPIRE1Q08AE8 756 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 HP1BP3Q5SSJ5 553 aaPredicted RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 RUFY4Q6ZNE9 571 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 FRMD5Q7Z6J6 570 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 CCDC105Q8IYK2 499 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 PSMD1Q99460 953 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 TYW1Q9NV66 732 aaKnown RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 WRAP73Q9P2S5 460 aaPredicted RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 ANKRD63C9JTQ0 380 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 PPP1R12BO60237 982 aaPredicted RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 MMEP08473 750 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 GCFC2P16383 781 aaKnown RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 TNFRSF8P28908 595 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 SEMA3FQ13275 785 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 EDRF1Q3B7T1 1238 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 LRCH2Q5VUJ6 765 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 PHLDB3Q6NSJ2 640 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 HIBCHQ6NVY1 386 aaPredicted RBP17.37■□□□□ 0.37
DKC1-213ENST00000620277 ARFGAP2Q8N6H7 521 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 ETNPPLQ8TBG4 499 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 ACTRT1Q8TDG2 376 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 DYDC1Q8WWB3 177 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 AMNQ9BXJ7 453 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 USP20Q9Y2K6 914 aa17.37■□□□□ 0.37
DKC1-213ENST00000620277 ALG6Q9Y672 507 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms