RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ALDH1A2O94788 518 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 PPM1AP35813 382 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 PRKCZQ05513 592 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 CKAP4Q07065 602 aaKnown RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 C12orf50Q8NA57 414 aaPredicted RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 ABI2Q9NYB9 513 aaPredicted RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 CREMQ03060 361 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF543Q08ER8 600 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 GRM4Q14833 912 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 UAP1Q16222 522 aaPredicted RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 TMEM143Q96AN5 459 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 SLC25A13Q9UJS0 675 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 CLIC2O15247 247 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 CAND2O75155 1236 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 CSF1RP07333 972 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 MBL2P11226 248 aaPredicted RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 ODC1P11926 461 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 RPGRIP1Q96KN7 1286 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 VPS16Q9H269 839 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 DENND2CQ68D51 928 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 TRIM48Q8IWZ4 208 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 RAB42Q8N4Z0 105 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 PAWRQ96IZ0 340 aaKnown RBP11.8□□□□□ -0.52
POLR2A-209ENST00000617998 EMSYQ7Z589 1322 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 RPTORQ8N122 1335 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 FAM186BQ8IYM0 893 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 TTC39CQ8N584 583 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 FLCNQ8NFG4 579 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 MOV10L1Q9BXT6 1211 aaKnown RBP11.79□□□□□ -0.52
POLR2A-209ENST00000617998 CLGNO14967 610 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 PDXDC1Q6P996 788 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 PRR23BQ6ZRT6 265 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 TRIML1Q8N9V2 468 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
POLR2A-209ENST00000617998 FBXW4P57775 412 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 SV2CQ496J9 727 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF280DQ6N043 979 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF296Q8WUU4 475 aaPredicted RBP11.79□□□□□ -0.52
POLR2A-209ENST00000617998 PRMT7Q9NVM4 692 aaPredicted RBP11.79□□□□□ -0.52
POLR2A-209ENST00000617998 CLDND1Q9NY35 253 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.79□□□□□ -0.52
POLR2A-209ENST00000617998 CAVIN2O95810 425 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 IL1R1P14778 569 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 CLUL1Q15846 466 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 KIZQ2M2Z5 673 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 SMC5Q8IY18 1101 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 NELFBQ8WX92 580 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 SH3KBP1Q96B97 665 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 KLRG1Q96E93 195 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 YWHABP31946 246 aaKnown RBP11.79□□□□□ -0.52
POLR2A-209ENST00000617998 ITM2BQ9Y287 266 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 ANGPTL3Q9Y5C1 460 aa11.79□□□□□ -0.52
POLR2A-209ENST00000617998 HARS2P49590 506 aaKnown RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 NT5DC4Q86YG4 428 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 MRPS23Q9Y3D9 190 aaKnown RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 CALCOCO2Q13137 446 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 CCDC149Q6ZUS6 474 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 DNAJB3Q8WWF6 145 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 SENP7Q9BQF6 1050 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 LSM14BQ9BX40 385 aaKnown RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 WEE1P30291 646 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 RPL10AP62906 217 aaKnown RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 DPYDQ12882 1025 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 MIR1-1HGQ9H1L0 117 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 ATXN3LQ9H3M9 355 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 FAM8A1Q9UBU6 413 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 MYMKA6NI61 221 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 DGAT1O75907 488 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.521e-8■■□□□ 12.1
POLR2A-209ENST00000617998 PRKCEQ02156 737 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 GPRASP2Q96D09 838 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 FTHL17Q9BXU8 183 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 TRPV2Q9Y5S1 764 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
POLR2A-209ENST00000617998 GMNNO75496 209 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 ADCY5O95622 1261 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 NFRKBQ6P4R8 1299 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 EPC1Q9H2F5 836 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
POLR2A-209ENST00000617998 ADH1AP07327 375 aa11.77□□□□□ -0.52
POLR2A-209ENST00000617998 RTP1P59025 263 aa11.77□□□□□ -0.52
POLR2A-209ENST00000617998 PTH1RQ03431 593 aa11.77□□□□□ -0.52
POLR2A-209ENST00000617998 PLPP4Q5VZY2 271 aa11.77□□□□□ -0.52
POLR2A-209ENST00000617998 TRPM5Q9NZQ8 1165 aa11.77□□□□□ -0.52
POLR2A-209ENST00000617998 PLA2G4CQ9UP65 541 aa11.77□□□□□ -0.52
POLR2A-209ENST00000617998 CFAP157Q5JU67 520 aa11.77□□□□□ -0.53
POLR2A-209ENST00000617998 TOGARAM2Q6ZUX3 1019 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms