RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 PPP1R9BQ96SB3 815 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 TMEM150BA6NC51 233 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 FGFR1OPO95684 399 aaKnown RBP12.96□□□□□ -0.34
PDPN-211ENST00000617617 NAMPTP43490 491 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 MARSP56192 900 aaKnown RBP12.96□□□□□ -0.34
PDPN-211ENST00000617617 HTRA3P83110 453 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 KNOP1Q1ED39 458 aaKnown RBP12.96□□□□□ -0.34
PDPN-211ENST00000617617 FAM178BQ8IXR5 827 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 GOLGA5Q8TBA6 731 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 NFKBIZQ9BYH8 718 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.34
PDPN-211ENST00000617617 ZMYM2Q9UBW7 1377 aa12.96□□□□□ -0.34
PDPN-211ENST00000617617 RRN3P2A6NIE6 340 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 H3BRB1 525 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 ADCY3O60266 1144 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 SORBS3O60504 671 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 POLGP54098 1239 aaPredicted RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 MTERF2Q49AM1 385 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 ODR4Q5SWX8 454 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 ANKRD40Q6AI12 368 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 KLHDC9Q8NEP7 349 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 MRFAP1L1Q96HT8 127 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 FGFBP2Q9BYJ0 223 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 TUT1Q9H6E5 874 aaKnown RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 ARHGAP28Q9P2N2 729 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 LIMA1Q9UHB6 759 aaKnown RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 ASAP2O43150 1006 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 MSCO60682 206 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 C22orf31O95567 290 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 EEF1GP26641 437 aaKnown RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 CASP5P51878 434 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
PDPN-211ENST00000617617 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 KAT2BQ92831 832 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 TSG101Q99816 390 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
PDPN-211ENST00000617617 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 SMTNP53814 917 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 PMS1P54277 932 aaKnown RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 DMP1Q13316 513 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 MXD4Q14582 209 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 CDCA2Q69YH5 1023 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 TMEM161BQ8NDZ6 487 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 RNPEPQ9H4A4 650 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 TMEM134Q9H6X4 195 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 MBLAC1A4D2B0 266 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 AP5Z1O43299 807 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 CALUO43852 315 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 ZEB2O60315 1214 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 PIGRP01833 764 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 MYBP10242 640 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 ADAM17P78536 824 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 ENPEPQ07075 957 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 LRRC55Q6ZSA7 311 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 APTXQ7Z2E3 356 aaKnown RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 SESTD1Q86VW0 696 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 TRIM50Q86XT4 487 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 GLIS3Q8NEA6 775 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 POLR3FQ9H1D9 316 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 NRCAMQ92823 1304 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 GNA14O95837 355 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 NPTX2P47972 431 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
PDPN-211ENST00000617617 RAD51AP2Q09MP3 1159 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 TBC1D8BQ0IIM8 1120 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 FAM102BQ5T8I3 360 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 IRF2BP1Q8IU81 584 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 IFT74Q96LB3 600 aa12.94□□□□□ -0.34
PDPN-211ENST00000617617 MAPK13O15264 365 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 RARBP10826 455 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 FKBP3Q00688 224 aaKnown RBP12.93□□□□□ -0.34
PDPN-211ENST00000617617 KLHL10Q6JEL2 608 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 FILIP1Q7Z7B0 1213 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 RAET1EQ8TD07 263 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 BSNDQ8WZ55 320 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 SLC16A3O15427 465 aaKnown RBP12.93□□□□□ -0.34
PDPN-211ENST00000617617 CBFA2T2O43439 604 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 GCNT3O95395 438 aa12.93□□□□□ -0.34
PDPN-211ENST00000617617 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms