RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
SNAP47-213ENST00000617596 ODF2LQ9ULJ1 636 aa17.98■□□□□ 0.47
SNAP47-213ENST00000617596 TRIM49BA6NDI0 452 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 MYBP10242 640 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 ZNF131P52739 623 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 GABPB1Q06547 395 aaPredicted RBP17.97■□□□□ 0.47
SNAP47-213ENST00000617596 HSP90AA4PQ58FG1 418 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 LRRC71Q8N4P6 559 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 SLC7A3Q8WY07 619 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
SNAP47-213ENST00000617596 DHX33Q9H6R0 707 aaKnown RBP17.97■□□□□ 0.47
SNAP47-213ENST00000617596 HBP1O60381 514 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 GJA9P57773 515 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 FAM193AP78312 1265 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 TBC1D8BQ0IIM8 1120 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
SNAP47-213ENST00000617596 NELFCDQ8IXH7 590 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 NELFBQ8WX92 580 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 FIZ1Q96SL8 496 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 KIFC3Q9BVG8 833 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 DACH1Q9UI36 760 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 PTPN22Q9Y2R2 807 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 BECN2A8MW95 431 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 PRPF6O94906 941 aaKnown RBP17.96■□□□□ 0.47
SNAP47-213ENST00000617596 PRMT2P55345 433 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 PEX3P56589 373 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 KCNA1Q09470 495 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 PSMD2Q13200 908 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 NCAPHQ15003 741 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 CXCL17Q6UXB2 119 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 SCFD1Q8WVM8 642 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 EEF2KMTQ96G04 330 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
SNAP47-213ENST00000617596 IKZF4Q9H2S9 585 aa17.96■□□□□ 0.47
SNAP47-213ENST00000617596 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
SNAP47-213ENST00000617596 MAFO75444 373 aaPredicted RBP17.95■□□□□ 0.46
SNAP47-213ENST00000617596 GCNT3O95395 438 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 F2P00734 622 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 PLS3P13797 630 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 GAP43P17677 238 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
SNAP47-213ENST00000617596 BRDTQ58F21 947 aaPredicted RBP17.95■□□□□ 0.46
SNAP47-213ENST00000617596 FAM178BQ8IXR5 827 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 MCPH1Q8NEM0 835 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 DRC1Q96MC2 740 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 SETD4Q9NVD3 440 aa17.95■□□□□ 0.46
SNAP47-213ENST00000617596 ARID2Q68CP9 1835 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 RBAK-RBAKDNI3L0D1 243 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 CAVIN2O95810 425 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 GJB1P08034 283 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 PAK1Q13153 545 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 MKRN4PQ13434 485 aaPredicted RBP17.94■□□□□ 0.46
SNAP47-213ENST00000617596 MFSD10Q14728 455 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 BPIFA3Q9BQP9 254 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 SEMA6BQ9H3T3 888 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 OLFML3Q9NRN5 406 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 CCDC169A6NNP5 214 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 SLC16A4O15374 487 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 HSPA8P11142 646 aaKnown RBP17.94■□□□□ 0.46
SNAP47-213ENST00000617596 RFC5P40937 340 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 LBX1P52954 281 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 MYL5Q02045 173 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 PPFIA1Q13136 1202 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 METTL13Q8N6R0 699 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 ASAP3Q8TDY4 903 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 ZNF668Q96K58 619 aaPredicted RBP17.94■□□□□ 0.46
SNAP47-213ENST00000617596 UPF3AQ9H1J1 476 aaKnown RBP17.94■□□□□ 0.46
SNAP47-213ENST00000617596 SPC25Q9HBM1 224 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 HMX1Q9NP08 348 aaPredicted RBP17.94■□□□□ 0.46
SNAP47-213ENST00000617596 OGFRQ9NZT2 677 aa17.94■□□□□ 0.46
SNAP47-213ENST00000617596 LARSQ9P2J5 1176 aaKnown RBP17.94■□□□□ 0.46
SNAP47-213ENST00000617596 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
SNAP47-213ENST00000617596 K7ENM7 598 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 PSMA7O14818 248 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 C22orf31O95567 290 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 KLRC1P26715 233 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 ERCC5P28715 1186 aaPredicted RBP17.93■□□□□ 0.46
SNAP47-213ENST00000617596 HOXD13P35453 343 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 PSEN2P49810 448 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 CLCN3P51790 818 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 STIM1Q13586 685 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 HIC1Q14526 733 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 GRIK4Q16099 956 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 ZNF720Q7Z2F6 126 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 KIFAP3Q92845 792 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 TIPINQ9BVW5 301 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 HSD3B7Q9H2F3 369 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 FANCLQ9NW38 375 aa17.93■□□□□ 0.46
SNAP47-213ENST00000617596 GOLGA6L19H0YKK7 550 aa17.92■□□□□ 0.46
SNAP47-213ENST00000617596 SMIM10L2AP0DMW4 78 aa17.92■□□□□ 0.46
SNAP47-213ENST00000617596 SMIM10L2BP0DMW5 78 aa17.92■□□□□ 0.46
SNAP47-213ENST00000617596 NPTX2P47972 431 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms