RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 DNAAF5Q86Y56 855 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 SAMD3Q8N6K7 520 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 DNERQ8NFT8 737 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 CBWD1Q9BRT8 395 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 RNF39Q9H2S5 420 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TYW1Q9NV66 732 aaKnown RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 ARMCX3Q9UH62 379 aaPredicted RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 LRRC53A6NM62 1247 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 MAFGO15525 162 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 CALUO43852 315 aaPredicted RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 STBD1O95210 358 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 GAP43P17677 238 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 POLR2FP61218 127 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 DLG4P78352 724 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 HAUS6Q7Z4H7 955 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 ERGIC2Q96RQ1 377 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 IWS1Q96ST2 819 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 LSM14BQ9BX40 385 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 GTPBP4Q9BZE4 634 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 MLXIPQ9HAP2 919 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 AGPAT3Q9NRZ7 376 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 DUSP10Q9Y6W6 482 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 NOL4O94818 638 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 KIF20AO95235 890 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 TFRCP02786 760 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 PLS3P13797 630 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 GNG11P61952 73 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 LRRN4CLQ8ND94 238 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 PCYT2Q99447 389 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 LARSQ9P2J5 1176 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 FBXO40Q9UH90 709 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 DBR1Q9UK59 544 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 ODF2LQ9ULJ1 636 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 PFASO15067 1338 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 SYNGAP1Q96PV0 1343 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 ANKRD63C9JTQ0 380 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 FARP2O94887 1054 aaPredicted RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 TCF7P36402 384 aaPredicted RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 NPTX2P47972 431 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 DRP2Q13474 957 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 EDRF1Q3B7T1 1238 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 XRRA1Q6P2D8 792 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 CYP26C1Q6V0L0 522 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 CACNA2D4Q7Z3S7 1137 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 NEK9Q8TD19 979 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 CEP63Q96MT8 703 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 DNAJC7Q99615 494 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 NHEJ1Q9H9Q4 299 aaPredicted RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 ZNF302Q9NR11 478 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 REXO2Q9Y3B8 237 aaKnown RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 EPN1Q9Y6I3 576 aaPredicted RBP8.55□□□□□ -1.04
NEK3-207ENST00000617054 ADGRA3Q8IWK6 1321 aa8.55□□□□□ -1.04
NEK3-207ENST00000617054 GSTTP1A0A1W2PQM5 241 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 EXOC3O60645 756 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 CCDC175P0C221 793 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 SUPT20HL2P0C7V6 817 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
NEK3-207ENST00000617054 SCNN1AP37088 669 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 MIS18BP1Q6P0N0 1132 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 NEK11Q8NG66 645 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 TRAPPC12Q8WVT3 735 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 ATP6V0A1Q93050 837 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 SAAL1Q96ER3 474 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
NEK3-207ENST00000617054 RCCD1A6NED2 376 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 ZSCAN12O43309 604 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 NDUFA10O95299 355 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 MUTP22033 750 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 LAMA2P24043 3122 aaKnown RBP8.54□□□□□ -1.04
NEK3-207ENST00000617054 ADORA2AP29274 412 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 HUNKP57058 714 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 BMT2Q1RMZ1 405 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 CBWD6Q4V339 395 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 CBWD3Q5JTY5 395 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 CBWD5Q5RIA9 395 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 TMTC1Q8IUR5 882 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 SMAP1Q8IYB5 467 aaPredicted RBP8.54□□□□□ -1.04
NEK3-207ENST00000617054 FAM186BQ8IYM0 893 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 C2orf69Q8N8R5 385 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 SLC35C1Q96A29 364 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 CDHR1Q96JP9 859 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 ARHGAP20Q9P2F6 1191 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 AJAP1Q9UKB5 411 aaPredicted RBP8.54□□□□□ -1.04
NEK3-207ENST00000617054 GUCA1BQ9UMX6 200 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 MYH9P35579 1960 aaKnown RBP8.54□□□□□ -1.04
NEK3-207ENST00000617054 WDR81Q562E7 1941 aa8.54□□□□□ -1.04
NEK3-207ENST00000617054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 DENND3A2RUS2 1198 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 LYPLA2O95372 231 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 SLC25A27O95847 323 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 GJB1P08034 283 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 EPB41P11171 864 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 EDNRBP24530 442 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 ZBED6P86452 979 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms