RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 COPS7BQ9H9Q2 264 aaPredicted RBP13.47□□□□□ -0.25
TCF4-248ENST00000616053 NDOR1Q9UHB4 597 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ATP8A1Q9Y2Q0 1164 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 COQ6Q9Y2Z9 468 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 LRRD1A4D1F6 860 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 TNNI3P19429 210 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 NEK2P51955 445 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 SLC25A24Q6NUK1 477 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 PHACTR4Q8IZ21 702 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.46□□□□□ -0.25
TCF4-248ENST00000616053 RUVBL2Q9Y230 463 aaKnown RBP13.46□□□□□ -0.25
TCF4-248ENST00000616053 NR2E3Q9Y5X4 410 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 SGO2Q562F6 1265 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 CEP68Q76N32 757 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 TRIM4Q9C037 500 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 HOXC10Q9NYD6 342 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 ZNF24P17028 368 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 TCEAL5Q5H9L2 206 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 DDIASQ8IXT1 998 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 POLR1DQ9Y2S0 133 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 PSMA2P25787 234 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 FAF2Q96CS3 445 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 OTUD5Q96G74 571 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
TCF4-248ENST00000616053 GCOM2Q9BZD3 368 aaPredicted RBP13.46□□□□□ -0.25
TCF4-248ENST00000616053 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 POLE3Q9NRF9 147 aa13.46□□□□□ -0.25
TCF4-248ENST00000616053 HMOX2P30519 316 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 CENPPQ6IPU0 288 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 ZNF507Q8TCN5 953 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.26
TCF4-248ENST00000616053 SAE1Q9UBE0 346 aaPredicted RBP13.46□□□□□ -0.26
TCF4-248ENST00000616053 PPARAQ07869 468 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 TBC1D1Q86TI0 1168 aaPredicted RBP13.46□□□□□ -0.26
TCF4-248ENST00000616053 MLKLQ8NB16 471 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 VPS37AQ8NEZ2 397 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 RFWD2Q8NHY2 731 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 COG1Q8WTW3 980 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 SEPT5Q99719 369 aaPredicted RBP13.46□□□□□ -0.26
TCF4-248ENST00000616053 ZCWPW1Q9H0M4 648 aa13.46□□□□□ -0.26
TCF4-248ENST00000616053 AK2P54819 239 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 TMED1Q13445 227 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 TOGARAM2Q6ZUX3 1019 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 CARD6Q9BX69 1037 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 LRRN2O75325 713 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 CYP4A22Q5TCH4 519 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 MAML1Q92585 1016 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 CNPPD1Q9BV87 410 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 ZHX2Q9Y6X8 837 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 TRIM27P14373 513 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 JAK1P23458 1154 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 SNX17Q15036 470 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 PSMC2P35998 433 aaKnown RBP13.45□□□□□ -0.26
TCF4-248ENST00000616053 SNAP25P60880 206 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 TMEM206Q9H813 350 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 MED4Q9NPJ6 270 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 RASSF9O75901 435 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
TCF4-248ENST00000616053 DDIT3P35638 169 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 ACAD11Q709F0 780 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 MMGT1Q8N4V1 131 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 MAGOHBQ96A72 148 aaKnown RBP13.45□□□□□ -0.26
TCF4-248ENST00000616053 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 CCDC189A1A4V9 331 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 ATP8B2P98198 1209 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 SNX31Q8N9S9 440 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 H7C1W4 665 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
TCF4-248ENST00000616053 ASAP2O43150 1006 aa13.45□□□□□ -0.26
TCF4-248ENST00000616053 ASCC2Q9H1I8 757 aaPredicted RBP13.45□□□□□ -0.26
TCF4-248ENST00000616053 MYBP10242 640 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 DHX9Q08211 1270 aaKnown RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 FAM167AQ96KS9 214 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 LATS2Q9NRM7 1088 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 STAP1Q9ULZ2 295 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 C2CD2LO14523 706 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 SPTLC1O15269 473 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 BIRC5O15392 142 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 ALOX15P16050 662 aaPredicted RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 CHRNA3P32297 505 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 FAM50BQ9Y247 325 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 HNRNPCP07910 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
TCF4-248ENST00000616053 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 BMP3P12645 472 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms