RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 SAFBQ15424 915 aaKnown RBP eCLIP28.26■■■□□ 2.11
VEGFA-227ENST00000615393 NCAPH2Q6IBW4 605 aa28.26■■■□□ 2.11
VEGFA-227ENST00000615393 ZNF668Q96K58 619 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-227ENST00000615393 UHRF1Q96T88 793 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-227ENST00000615393 ELAC1Q9H777 363 aaKnown RBP28.26■■■□□ 2.11
VEGFA-227ENST00000615393 PPME1Q9Y570 386 aa28.26■■■□□ 2.11
VEGFA-227ENST00000615393 XIRP2A4UGR9 3374 aa28.26■■■□□ 2.11
VEGFA-227ENST00000615393 GATMP50440 423 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 FAM189BP81408 668 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 DRP2Q13474 957 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 CALCRLQ16602 461 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 NAALADL2Q58DX5 795 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 PLA2G4FQ68DD2 849 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 EXOC8Q8IYI6 725 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 P2RX5Q93086 422 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 LXNQ9BS40 222 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 GCOM2Q9BZD3 368 aaPredicted RBP28.25■■■□□ 2.11
VEGFA-227ENST00000615393 NSUN3Q9H649 340 aaKnown RBP28.25■■■□□ 2.11
VEGFA-227ENST00000615393 UBE2ZQ9H832 354 aaPredicted RBP28.25■■■□□ 2.11
VEGFA-227ENST00000615393 ATP6V0A4Q9HBG4 840 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 CYP26B1Q9NR63 512 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 SH2B1Q9NRF2 756 aaPredicted RBP28.25■■■□□ 2.11
VEGFA-227ENST00000615393 TMEM161AQ9NX61 479 aa28.25■■■□□ 2.11
VEGFA-227ENST00000615393 TNFRSF10AO00220 468 aa28.24■■■□□ 2.11
VEGFA-227ENST00000615393 C4orf19Q8IY42 314 aa28.24■■■□□ 2.11
VEGFA-227ENST00000615393 SUCLA2Q9P2R7 463 aaPredicted RBP28.24■■■□□ 2.11
VEGFA-227ENST00000615393 GRM6O15303 877 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 NEMFO60524 1076 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 HMGN5P82970 282 aaKnown RBP28.23■■■□□ 2.11
VEGFA-227ENST00000615393 SPIRE1Q08AE8 756 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 OTUD6AQ7L8S5 288 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 ZNF410Q86VK4 478 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 SLC7A3Q8WY07 619 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 C8orf76Q96K31 380 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 CEP170P1Q96L14 293 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 KIF2CQ99661 725 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 ZSWIM4Q9H7M6 989 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 PCDHA12Q9UN75 941 aa28.23■■■□□ 2.11
VEGFA-227ENST00000615393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.22■■■□□ 2.11
VEGFA-227ENST00000615393 TBKBP1A7MCY6 615 aa28.22■■■□□ 2.11
VEGFA-227ENST00000615393 TCEAL5Q5H9L2 206 aa28.22■■■□□ 2.11
VEGFA-227ENST00000615393 RHPN2Q8IUC4 686 aa28.22■■■□□ 2.11
VEGFA-227ENST00000615393 DYDC2Q96IM9 177 aa28.22■■■□□ 2.11
VEGFA-227ENST00000615393 INO80BQ9C086 356 aaPredicted RBP28.22■■■□□ 2.11
VEGFA-227ENST00000615393 RGL1Q9NZL6 768 aa28.22■■■□□ 2.11
VEGFA-227ENST00000615393 WRAP73Q9P2S5 460 aaPredicted RBP28.22■■■□□ 2.11
VEGFA-227ENST00000615393 HOXA2O43364 376 aa28.21■■■□□ 2.11
VEGFA-227ENST00000615393 YWHABP31946 246 aaKnown RBP28.21■■■□□ 2.11
VEGFA-227ENST00000615393 RBM25P49756 843 aaKnown RBP28.21■■■□□ 2.11
VEGFA-227ENST00000615393 POLGP54098 1239 aaPredicted RBP28.21■■■□□ 2.11
VEGFA-227ENST00000615393 NPEPPSP55786 919 aa28.21■■■□□ 2.11
VEGFA-227ENST00000615393 GUCY1B3Q02153 619 aa28.21■■■□□ 2.11
VEGFA-227ENST00000615393 SPOUT1Q5T280 376 aaKnown RBP28.21■■■□□ 2.11
VEGFA-227ENST00000615393 FAM102BQ5T8I3 360 aa28.21■■■□□ 2.11
VEGFA-227ENST00000615393 AAASQ9NRG9 546 aa28.21■■■□□ 2.11
VEGFA-227ENST00000615393 PLAGL2Q9UPG8 496 aa28.21■■■□□ 2.11
VEGFA-227ENST00000615393 CUL9Q8IWT3 2517 aa28.2■■■□□ 2.11
VEGFA-227ENST00000615393 A0A087WZ62 844 aa28.2■■■□□ 2.1
VEGFA-227ENST00000615393 SFPQP23246 707 aaKnown RBP eCLIP28.2■■■□□ 2.1
VEGFA-227ENST00000615393 RFC5P40937 340 aa28.2■■■□□ 2.1
VEGFA-227ENST00000615393 CYP4A11Q02928 519 aa28.2■■■□□ 2.1
VEGFA-227ENST00000615393 FDXACB1Q9BRP7 624 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-227ENST00000615393 TTC12Q9H892 705 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-227ENST00000615393 ALG13Q9NP73 1137 aaKnown RBP28.2■■■□□ 2.1
VEGFA-227ENST00000615393 DACT1Q9NYF0 836 aa28.2■■■□□ 2.1
VEGFA-227ENST00000615393 FGFR1P11362 822 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 FGFR4P22455 802 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 KCNA5P22460 613 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 CTTNQ14247 550 aaKnown RBP28.19■■■□□ 2.1
VEGFA-227ENST00000615393 FAM184AQ8NB25 1140 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 KLHL23Q8NBE8 558 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 NEK9Q8TD19 979 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 NLRP4Q96MN2 994 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 DHX33Q9H6R0 707 aaKnown RBP28.19■■■□□ 2.1
VEGFA-227ENST00000615393 PCDHB12Q9Y5F1 795 aa28.19■■■□□ 2.1
VEGFA-227ENST00000615393 NCK2O43639 380 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 GAS2O43903 313 aaKnown RBP28.18■■■□□ 2.1
VEGFA-227ENST00000615393 CSDE1O75534 798 aaKnown RBP28.18■■■□□ 2.1
VEGFA-227ENST00000615393 ITGB1P05556 798 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 TXKP42681 527 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 ECHDC2Q86YB7 292 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 TPH2Q8IWU9 490 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 ZNF579Q8NAF0 562 aaKnown RBP28.18■■■□□ 2.1
VEGFA-227ENST00000615393 EIF2AK1Q9BQI3 630 aaKnown RBP28.18■■■□□ 2.1
VEGFA-227ENST00000615393 TMEM117Q9H0C3 514 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 CHST12Q9NRB3 414 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 COL4A3BPQ9Y5P4 624 aa28.18■■■□□ 2.1
VEGFA-227ENST00000615393 WNT7AO00755 349 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 SLITRK3O94933 977 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 RABEP1Q15276 862 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 LEXMQ3ZCV2 418 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 XKR9Q5GH70 373 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 ABI1Q8IZP0 508 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 SPPL3Q8TCT6 385 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 TCP11Q8WWU5 503 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 PSPC1Q8WXF1 523 aaKnown RBP28.17■■■□□ 2.1
VEGFA-227ENST00000615393 PABPC5Q96DU9 382 aaKnown RBP28.17■■■□□ 2.1
VEGFA-227ENST00000615393 MTMR9Q96QG7 549 aa28.17■■■□□ 2.1
VEGFA-227ENST00000615393 FOXP1Q9H334 677 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-227ENST00000615393 KIAA1671Q9BY89 1806 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms