RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 NR5A1Q13285 461 aa19.26■□□□□ 0.67
CCL3-204ENST00000613922 DRP2Q13474 957 aa19.26■□□□□ 0.67
CCL3-204ENST00000613922 NEK9Q8TD19 979 aa19.26■□□□□ 0.67
CCL3-204ENST00000613922 PABPC5Q96DU9 382 aaKnown RBP19.26■□□□□ 0.67
CCL3-204ENST00000613922 TMEM161AQ9NX61 479 aa19.26■□□□□ 0.67
CCL3-204ENST00000613922 FAM205CA6NFA0 338 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 ITGB1P05556 798 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 KCNA5P22460 613 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 QARSP47897 775 aaKnown RBP19.25■□□□□ 0.67
CCL3-204ENST00000613922 CDC42EP1Q00587 391 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
CCL3-204ENST00000613922 ST3GAL1Q11201 340 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 CAMK1Q14012 370 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 FAM102BQ5T8I3 360 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 ANO5Q75V66 913 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.25■□□□□ 0.67
CCL3-204ENST00000613922 SPPL3Q8TCT6 385 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 BRMS1Q9HCU9 246 aa19.25■□□□□ 0.67
CCL3-204ENST00000613922 ALG13Q9NP73 1137 aaKnown RBP19.25■□□□□ 0.67
CCL3-204ENST00000613922 TBKBP1A7MCY6 615 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 DDX11L8A8MPP1 907 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 NCK2O43639 380 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 JAK2O60674 1132 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 DKC1O60832 514 aaKnown RBP eCLIP19.24■□□□□ 0.67
CCL3-204ENST00000613922 MAFO75444 373 aaPredicted RBP19.24■□□□□ 0.67
CCL3-204ENST00000613922 P4HBP07237 508 aaKnown RBP19.24■□□□□ 0.67
CCL3-204ENST00000613922 KLHL23Q8NBE8 558 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 ZNF668Q96K58 619 aaPredicted RBP19.24■□□□□ 0.67
CCL3-204ENST00000613922 SH2D3AQ9BRG2 576 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 ATP6V0A4Q9HBG4 840 aa19.24■□□□□ 0.67
CCL3-204ENST00000613922 ZSCAN20P17040 1043 aaPredicted RBP19.23■□□□□ 0.67
CCL3-204ENST00000613922 IBSPP21815 317 aaPredicted RBP19.23■□□□□ 0.67
CCL3-204ENST00000613922 DNAJB1P25685 340 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 DNM2P50570 870 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 SPIRE1Q08AE8 756 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 EPHA7Q15375 998 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 CTC1Q2NKJ3 1217 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 SLFN12Q8IYM2 578 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 NLRP7Q8WX94 980 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 CYP26B1Q9NR63 512 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 RNF19AQ9NV58 838 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 WRAP73Q9P2S5 460 aaPredicted RBP19.23■□□□□ 0.67
CCL3-204ENST00000613922 PPME1Q9Y570 386 aa19.23■□□□□ 0.67
CCL3-204ENST00000613922 FGFR1P11362 822 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 HYAL1Q12794 435 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 PUS10Q3MIT2 529 aaKnown RBP19.22■□□□□ 0.67
CCL3-204ENST00000613922 PLA2G4FQ68DD2 849 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 ZNF410Q86VK4 478 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 ECHDC2Q86YB7 292 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 C4orf19Q8IY42 314 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 SCLT1Q96NL6 688 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 JPH2Q9BR39 696 aaPredicted RBP19.22■□□□□ 0.67
CCL3-204ENST00000613922 GCOM2Q9BZD3 368 aaPredicted RBP19.22■□□□□ 0.67
CCL3-204ENST00000613922 TMEM117Q9H0C3 514 aa19.22■□□□□ 0.67
CCL3-204ENST00000613922 SUCLA2Q9P2R7 463 aaPredicted RBP19.22■□□□□ 0.67
CCL3-204ENST00000613922 GRXCR2A6NFK2 248 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 BTBD18B2RXH4 712 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 HOXA2O43364 376 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 BAG4O95429 457 aaKnown RBP19.21■□□□□ 0.67
CCL3-204ENST00000613922 FGFR4P22455 802 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 NPEPPSP55786 919 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 PTCRAQ6ISU1 281 aaPredicted RBP19.21■□□□□ 0.67
CCL3-204ENST00000613922 ZNF598Q86UK7 904 aaKnown RBP19.21■□□□□ 0.67
CCL3-204ENST00000613922 DIS3L2Q8IYB7 885 aaKnown RBP19.21■□□□□ 0.67
CCL3-204ENST00000613922 POF1BQ8WVV4 589 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 CASD1Q96PB1 797 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 LXNQ9BS40 222 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 CWH43Q9H720 699 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 AAASQ9NRG9 546 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 TYW1Q9NV66 732 aaKnown RBP19.21■□□□□ 0.67
CCL3-204ENST00000613922 LIMCH1Q9UPQ0 1083 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 PCDHB12Q9Y5F1 795 aa19.21■□□□□ 0.67
CCL3-204ENST00000613922 A0A087WZ62 844 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 A0A0U1RQF3 1178 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 H3BQ06 376 aaPredicted RBP19.2■□□□□ 0.66
CCL3-204ENST00000613922 MARCH6O60337 910 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 LTBRP36941 435 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 TRIM29Q14134 588 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 NCAPH2Q6IBW4 605 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
CCL3-204ENST00000613922 COLGALT1Q8NBJ5 622 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 FDXACB1Q9BRP7 624 aaPredicted RBP19.2■□□□□ 0.66
CCL3-204ENST00000613922 DHX33Q9H6R0 707 aaKnown RBP19.2■□□□□ 0.66
CCL3-204ENST00000613922 CHST12Q9NRB3 414 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 CLDND1Q9NY35 253 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 RGL1Q9NZL6 768 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 HCSTQ9UBK5 93 aa19.2■□□□□ 0.66
CCL3-204ENST00000613922 CSDE1O75534 798 aaKnown RBP19.19■□□□□ 0.66
CCL3-204ENST00000613922 IL9P15248 144 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 ATF7P17544 494 aaPredicted RBP19.19■□□□□ 0.66
CCL3-204ENST00000613922 IRS1P35568 1242 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 UBE3AQ05086 875 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 CSPP1Q1MSJ5 1256 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 SPOUT1Q5T280 376 aaKnown RBP19.19■□□□□ 0.66
CCL3-204ENST00000613922 RHPN2Q8IUC4 686 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 FAM178BQ8IXR5 827 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 EXOC8Q8IYI6 725 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 DYDC2Q96IM9 177 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 CEP170P1Q96L14 293 aa19.19■□□□□ 0.66
CCL3-204ENST00000613922 TRAIPQ9BWF2 469 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms