RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 POTEDQ86YR6 584 aa25.51■■□□□ 1.67
FAM228B-208ENST00000613899 SLFN12Q8IYM2 578 aa25.51■■□□□ 1.67
FAM228B-208ENST00000613899 PABPC5Q96DU9 382 aaKnown RBP25.51■■□□□ 1.67
FAM228B-208ENST00000613899 CEP89Q96ST8 783 aa25.51■■□□□ 1.67
FAM228B-208ENST00000613899 ATP6V0A4Q9HBG4 840 aa25.51■■□□□ 1.67
FAM228B-208ENST00000613899 PLAGL2Q9UPG8 496 aa25.51■■□□□ 1.67
FAM228B-208ENST00000613899 BDP1A6H8Y1 2624 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 IGKV6-21A0A0C4DH24 114 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 TMEM150BA6NC51 233 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 TBKBP1A7MCY6 615 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 EML1O00423 815 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 NCK2O43639 380 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 EARS2Q5JPH6 523 aaKnown RBP25.5■■□□□ 1.67
FAM228B-208ENST00000613899 HAS1Q92839 578 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 TNFRSF25Q93038 417 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 ALG13Q9NP73 1137 aaKnown RBP25.5■■□□□ 1.67
FAM228B-208ENST00000613899 AAASQ9NRG9 546 aa25.5■■□□□ 1.67
FAM228B-208ENST00000613899 HOXA2O43364 376 aa25.49■■□□□ 1.67
FAM228B-208ENST00000613899 BAG4O95429 457 aaKnown RBP25.49■■□□□ 1.67
FAM228B-208ENST00000613899 P4HBP07237 508 aaKnown RBP25.49■■□□□ 1.67
FAM228B-208ENST00000613899 FAM189BP81408 668 aa25.49■■□□□ 1.67
FAM228B-208ENST00000613899 COL19A1Q14993 1142 aa25.49■■□□□ 1.67
FAM228B-208ENST00000613899 ANO5Q75V66 913 aa25.49■■□□□ 1.67
FAM228B-208ENST00000613899 ZNF668Q96K58 619 aaPredicted RBP25.49■■□□□ 1.67
FAM228B-208ENST00000613899 GCOM2Q9BZD3 368 aaPredicted RBP25.49■■□□□ 1.67
FAM228B-208ENST00000613899 PPME1Q9Y570 386 aa25.49■■□□□ 1.67
FAM228B-208ENST00000613899 FAM205CA6NFA0 338 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 JAK2O60674 1132 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 MAFO75444 373 aaPredicted RBP25.48■■□□□ 1.67
FAM228B-208ENST00000613899 ITGB1P05556 798 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 DRP2Q13474 957 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 PUS10Q3MIT2 529 aaKnown RBP25.48■■□□□ 1.67
FAM228B-208ENST00000613899 SPOUT1Q5T280 376 aaKnown RBP25.48■■□□□ 1.67
FAM228B-208ENST00000613899 FAM102BQ5T8I3 360 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 ZNF410Q86VK4 478 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 KLHL23Q8NBE8 558 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 NEK9Q8TD19 979 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 PPP2R3CQ969Q6 453 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 SH2D3AQ9BRG2 576 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 CYP26B1Q9NR63 512 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 PCDHB12Q9Y5F1 795 aa25.48■■□□□ 1.67
FAM228B-208ENST00000613899 EPHA7Q15375 998 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 PLA2G4FQ68DD2 849 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 NCAPH2Q6IBW4 605 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 DIS3L2Q8IYB7 885 aaKnown RBP25.47■■□□□ 1.67
FAM228B-208ENST00000613899 EXOC8Q8IYI6 725 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 SLC7A3Q8WY07 619 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 LXNQ9BS40 222 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 DACT1Q9NYF0 836 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 PLXNA4Q9HCM2 1894 aa25.47■■□□□ 1.67
FAM228B-208ENST00000613899 FGFR1P11362 822 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 SFPQP23246 707 aaKnown RBP eCLIP25.46■■□□□ 1.67
FAM228B-208ENST00000613899 CSPP1Q1MSJ5 1256 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 EP400NLQ6ZTU2 488 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 C4orf19Q8IY42 314 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.46■■□□□ 1.67
FAM228B-208ENST00000613899 SPPL3Q8TCT6 385 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 INO80BQ9C086 356 aaPredicted RBP25.46■■□□□ 1.67
FAM228B-208ENST00000613899 TMEM117Q9H0C3 514 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 CLDND1Q9NY35 253 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 SUCLA2Q9P2R7 463 aaPredicted RBP25.46■■□□□ 1.67
FAM228B-208ENST00000613899 LIMCH1Q9UPQ0 1083 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 ARID2Q68CP9 1835 aa25.46■■□□□ 1.67
FAM228B-208ENST00000613899 BTBD18B2RXH4 712 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 CSPG5O95196 566 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 SPIRE1Q08AE8 756 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 ST3GAL1Q11201 340 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 PTCRAQ6ISU1 281 aaPredicted RBP25.45■■□□□ 1.66
FAM228B-208ENST00000613899 ECHDC2Q86YB7 292 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 RHPN2Q8IUC4 686 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 ABI1Q8IZP0 508 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 CEP170P1Q96L14 293 aa25.45■■□□□ 1.66
FAM228B-208ENST00000613899 A0A087WZ62 844 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 H3BQ06 376 aaPredicted RBP25.44■■□□□ 1.66
FAM228B-208ENST00000613899 LAG3P18627 525 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 FGFR4P22455 802 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 RFC5P40937 340 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 FOSBP53539 338 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 POLGP54098 1239 aaPredicted RBP25.44■■□□□ 1.66
FAM228B-208ENST00000613899 UBE3AQ05086 875 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 HYAL1Q12794 435 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 CAMK1Q14012 370 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 POF1BQ8WVV4 589 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 FDXACB1Q9BRP7 624 aaPredicted RBP25.44■■□□□ 1.66
FAM228B-208ENST00000613899 CHST12Q9NRB3 414 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 TYW1Q9NV66 732 aaKnown RBP25.44■■□□□ 1.66
FAM228B-208ENST00000613899 WRAP73Q9P2S5 460 aaPredicted RBP25.44■■□□□ 1.66
FAM228B-208ENST00000613899 FAM50BQ9Y247 325 aa25.44■■□□□ 1.66
FAM228B-208ENST00000613899 A0A0U1RQF3 1178 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 YWHABP31946 246 aaKnown RBP25.43■■□□□ 1.66
FAM228B-208ENST00000613899 NPEPPSP55786 919 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 SAFBQ15424 915 aaKnown RBP eCLIP25.43■■□□□ 1.66
FAM228B-208ENST00000613899 CALCRLQ16602 461 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 CTC1Q2NKJ3 1217 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 OTUD6AQ7L8S5 288 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 LRRC43Q8N309 656 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 COLGALT1Q8NBJ5 622 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 NLRP4Q96MN2 994 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 ZSWIM4Q9H7M6 989 aa25.43■■□□□ 1.66
FAM228B-208ENST00000613899 GAS2O43903 313 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms