RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 ZNF710Q8N1W2 664 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 KCTD17Q8N5Z5 321 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 TCP11Q8WWU5 503 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 PRPF31Q8WWY3 499 aaKnown RBP18.49■□□□□ 0.55
IRF1-211ENST00000613424 ZNF668Q96K58 619 aaPredicted RBP18.49■□□□□ 0.55
IRF1-211ENST00000613424 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
IRF1-211ENST00000613424 OSMRQ99650 979 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 CCSER1Q9C0I3 900 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 AGO3Q9H9G7 860 aaKnown RBP18.49■□□□□ 0.55
IRF1-211ENST00000613424 ATP6V0A4Q9HBG4 840 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 RCOR1Q9UKL0 485 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
IRF1-211ENST00000613424 SIP14410 1827 aa18.49■□□□□ 0.55
IRF1-211ENST00000613424 KARSQ15046 597 aaKnown RBP18.48■□□□□ 0.55
IRF1-211ENST00000613424 RASIP1Q5U651 963 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 MAEAQ7L5Y9 396 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 USP38Q8NB14 1042 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 KCNG4Q8TDN1 519 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 TMEM40Q8WWA1 233 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 PSPC1Q8WXF1 523 aaKnown RBP18.48■□□□□ 0.55
IRF1-211ENST00000613424 SEPT8Q92599 483 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
IRF1-211ENST00000613424 IFIH1Q9BYX4 1025 aaKnown RBP18.48■□□□□ 0.55
IRF1-211ENST00000613424 TSHZ2Q9NRE2 1034 aa18.48■□□□□ 0.55
IRF1-211ENST00000613424 CXXC1Q9P0U4 656 aaPredicted RBP18.48■□□□□ 0.55
IRF1-211ENST00000613424 NOC2LQ9Y3T9 749 aaKnown RBP18.48■□□□□ 0.55
IRF1-211ENST00000613424 LOXHD1Q8IVV2 1947 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 CYP11B2P19099 503 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 CD52P31358 61 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 ARL2P36404 184 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 KRT85P78386 507 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 IKBKEQ14164 716 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 NLRP7Q8WX94 980 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 PADI3Q9ULW8 664 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 PCDHA7Q9UN72 937 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 COL4A3BPQ9Y5P4 624 aa18.47■□□□□ 0.55
IRF1-211ENST00000613424 A0A087WZ62 844 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 ZBBXA8MT70 800 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 ASAP2O43150 1006 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 CUTAO60888 179 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 RPS6KA5O75582 802 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 BAIAP3O94812 1187 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 PLCG1P19174 1290 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.55
IRF1-211ENST00000613424 LAMTOR4Q0VGL1 99 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 AXDND1Q5T1B0 1012 aaPredicted RBP18.46■□□□□ 0.55
IRF1-211ENST00000613424 ZNF410Q86VK4 478 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 SYT2Q8N9I0 419 aaPredicted RBP18.46■□□□□ 0.55
IRF1-211ENST00000613424 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 RASSF8Q8NHQ8 419 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 LRRC15Q8TF66 581 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 LEO1Q8WVC0 666 aaPredicted RBP18.46■□□□□ 0.55
IRF1-211ENST00000613424 APBB2Q92870 758 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 NLRP4Q96MN2 994 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 SCLT1Q96NL6 688 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 FDXACB1Q9BRP7 624 aaPredicted RBP18.46■□□□□ 0.55
IRF1-211ENST00000613424 MTIF3Q9H2K0 278 aaKnown RBP18.46■□□□□ 0.55
IRF1-211ENST00000613424 GPRC5CQ9NQ84 441 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 LAMA3Q16787 3333 aa18.46■□□□□ 0.55
IRF1-211ENST00000613424 ABHD14A-ACY1A0A1B0GW23 586 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 PLA2G4BP0C869 781 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 SRGAP2CP0DJJ0 459 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 DARSP14868 501 aaKnown RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 EIF4BP23588 611 aaKnown RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 TXLNAP40222 546 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 ME1P48163 572 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 SLC12A3P55017 1021 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 PAK2Q13177 524 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 MXD4Q14582 209 aaPredicted RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 HABP4Q5JVS0 413 aaKnown RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 FAM102BQ5T8I3 360 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 RINT1Q6NUQ1 792 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 FAM228AQ86W67 206 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 GCOM2Q9BZD3 368 aaPredicted RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 POLR3FQ9H1D9 316 aaPredicted RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 IFT122Q9HBG6 1241 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 POLD4Q9HCU8 107 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 BLOC1S4Q9NUP1 217 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 CCDC39Q9UFE4 941 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 CIZ1Q9ULV3 898 aaPredicted RBP18.45■□□□□ 0.54
IRF1-211ENST00000613424 ST3GAL5Q9UNP4 418 aa18.45■□□□□ 0.54
IRF1-211ENST00000613424 GPR182O15218 404 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 EFCAB14O75071 495 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 CSDE1O75534 798 aaKnown RBP18.44■□□□□ 0.54
IRF1-211ENST00000613424 SSBP05455 408 aaKnown RBP eCLIP18.44■□□□□ 0.54
IRF1-211ENST00000613424 GLRA2P23416 452 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 NFX1Q12986 1120 aaKnown RBP18.44■□□□□ 0.54
IRF1-211ENST00000613424 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 RRAGBQ5VZM2 374 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 SHC4Q6S5L8 630 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 C1orf186Q6ZWK4 172 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 ASAP3Q8TDY4 903 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 RAD54LQ92698 747 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 SPATA32Q96LK8 384 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 PANK2Q9BZ23 570 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 SLC4A7Q9Y6M7 1214 aa18.44■□□□□ 0.54
IRF1-211ENST00000613424 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
IRF1-211ENST00000613424 TCHHQ07283 1943 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms