RNA–Protein interactions for RNA: ENST00000613246.4

PTPRJ-207, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRJ, Length 7,851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-207ENST00000613246 SPTLC3Q9NUV7 552 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 AIPL1Q9NZN9 384 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 CCDC151A5D8V7 595 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 ICA1Q05084 483 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 ABCB5Q2M3G0 1257 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 CCDC103Q8IW40 242 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 TGS1Q96RS0 853 aaKnown RBP19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 SYNDIG1Q9H7V2 258 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 EHD2Q9NZN4 543 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 TRPM2O94759 1503 aa19.81■□□□□ 0.76
PTPRJ-207ENST00000613246 LAD1O00515 517 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 NNMTP40261 264 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 ARL4CP56559 192 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 MFN1Q8IWA4 741 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 INPP5DQ92835 1189 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 PARD6BQ9BYG5 372 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 MAP3K15Q6ZN16 1313 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 ST13P50502 369 aaKnown RBP19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 AHI1Q8N157 1196 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 RAB42Q8N4Z0 105 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 RNF14Q9UBS8 474 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 IDI1Q13907 227 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 FANCBQ8NB91 859 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 DIS3LQ8TF46 1054 aaKnown RBP19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 ARL8AQ96BM9 186 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 LSG1Q9H089 658 aaKnown RBP19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 BRD8Q9H0E9 1235 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 ARHGAP17Q68EM7 881 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 ARHGAP18Q8N392 663 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 SH3GL1Q99961 368 aa19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 FARP1Q9Y4F1 1045 aaPredicted RBP19.8■□□□□ 0.76
PTPRJ-207ENST00000613246 NPM3O75607 178 aaKnown RBP19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 ZNF658Q5TYW1 1059 aaPredicted RBP19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 NUP93Q8N1F7 819 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 MTERF3Q96E29 417 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 GCOM2Q9BZD3 368 aaPredicted RBP19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CUEDC2Q9H467 287 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 RNPEPQ9H4A4 650 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 FAM96AQ9H5X1 160 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CUL7Q14999 1698 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 PASD1Q8IV76 773 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 P2RX5Q93086 422 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 TBC1D23Q9NUY8 699 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 C5orf58C9J3I9 102 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CYP26B1Q9NR63 512 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 NSMCE4AQ9NXX6 385 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 TMEM191CA6NGB0 347 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 KRT38O76015 456 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 GRK2P25098 689 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 GPR162Q16538 588 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 MDH1BQ5I0G3 518 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 BTG4Q9NY30 223 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 PCDHA7Q9UN72 937 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CTIFO43310 598 aaKnown RBP19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 OSBPP22059 807 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CTSWP56202 376 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 IFNL3Q8IZI9 196 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 COG1Q8WTW3 980 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 SOX13Q9UN79 622 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 CHUKO15111 745 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 FLT4P35916 1363 aa19.79■□□□□ 0.76
PTPRJ-207ENST00000613246 FASTKD1Q53R41 847 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 GPBP1L1Q9HC44 474 aaPredicted RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ANAPC7Q9UJX3 599 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 DEFA1P59665 94 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 DEFA3P59666 94 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 GCKRQ14397 625 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ADD1P35611 737 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 MAGOHP61326 146 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 FKBP3Q00688 224 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 RUNX1T1Q06455 604 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 CAPRIN2Q6IMN6 1127 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ATXN7L3BQ96GX2 97 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 MYO1GB0I1T2 1018 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 TUBGCP3Q96CW5 907 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 MAD2L2Q9UI95 211 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 TTC7AQ9ULT0 858 aaPredicted RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 SYNGAP1Q96PV0 1343 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 EIF4A3P38919 411 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 OR6B3Q8NGW1 331 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ASIC4Q96FT7 647 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 DEPDC7Q96QD5 511 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ZBED2Q9BTP6 218 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 DMAP1Q9NPF5 467 aaPredicted RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 BFSP2Q13515 415 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 SMAD1Q15797 465 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 MPP6Q9NZW5 540 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 BTBD18B2RXH4 712 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ANKRD65E5RJM6 399 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 FGGP02679 453 aa19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 ADD3Q9UEY8 706 aaKnown RBP19.78■□□□□ 0.76
PTPRJ-207ENST00000613246 LRRC53A6NM62 1247 aa19.77■□□□□ 0.76
PTPRJ-207ENST00000613246 SERPINB1P30740 379 aa19.77■□□□□ 0.76
PTPRJ-207ENST00000613246 NUP62P37198 522 aaPredicted RBP19.77■□□□□ 0.76
PTPRJ-207ENST00000613246 CACNB1Q02641 598 aaPredicted RBP19.77■□□□□ 0.76
PTPRJ-207ENST00000613246 ARHGEF6Q15052 776 aa19.77■□□□□ 0.76
PTPRJ-207ENST00000613246 DOK7Q18PE1 504 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms