RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 RNF187Q5TA31 235 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 PRR5LQ6MZQ0 368 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 CYB5D1Q6P9G0 228 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 PEX26Q7Z412 305 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 LRRC45Q96CN5 670 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 MYCBPQ99417 103 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 CENPHQ9H3R5 247 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 GCNT4Q9P109 453 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 WRAP73Q9P2S5 460 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 ANKRD63C9JTQ0 380 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 MGRN1O60291 552 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 UFL1O94874 794 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 SNAP25P60880 206 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZNF211Q13398 564 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 Q4G0T1 1027 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 ZC2HC1CQ53FD0 456 aaPredicted RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 TLDC1Q6P9B6 456 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 DAAM2Q86T65 1068 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 TBC1D16Q8TBP0 767 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 U2AF1L4Q8WU68 220 aaKnown RBP8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 CENPTQ96BT3 561 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 THAP2Q9H0W7 228 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 CXorf56Q9H5V9 222 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 PCDHAC2Q9Y5I4 1007 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 LRRC37AA6NMS7 1700 aa8.09□□□□□ -1.11
PPARGC1A-217ENST00000613098 TCRBV7S2A1N4TA0A589 114 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 GTPBP10A4D1E9 387 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 C21orf2O43822 256 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 H2AFZP0C0S5 128 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 XRCC5P13010 732 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 MRPL12P52815 198 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 JAG1P78504 1218 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 NFIAQ12857 509 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SIX1Q15475 284 aaPredicted RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 DCAF17Q5H9S7 520 aaPredicted RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 PHLDB3Q6NSJ2 640 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 H2AFVQ71UI9 128 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 FBXO25Q8TCJ0 367 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 TAF4BQ92750 862 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 KRT35Q92764 455 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 XPO6Q96QU8 1125 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SPAG5Q96R06 1193 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 FAM129AQ9BZQ8 928 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 TYW1Q9NV66 732 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 DMAC2Q9NW81 257 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 ATP8A1Q9Y2Q0 1164 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SLC16A3O15427 465 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 MSH4O15457 936 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 KIAA0754O94854 1291 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 ALAS1P13196 640 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 ANXA13P27216 316 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 MMP14P50281 582 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 ARHGAP4P98171 946 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SPDYCQ5MJ68 293 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 MOXD1Q6UVY6 613 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 ADAT2Q7Z6V5 191 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 PRELID2Q8N945 189 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 PSMD1Q99460 953 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 HSD17B14Q9BPX1 270 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 ERP44Q9BS26 406 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 STRA6Q9BX79 667 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 TRIM31Q9BZY9 425 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 LUC7LQ9NQ29 371 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 RGL1Q9NZL6 768 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SLC12A4Q9UP95 1085 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 AFF2P51816 1311 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SMCHD1A6NHR9 2005 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 LY75O60449 1722 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 IGLV3-22A0A075B6J6 115 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 CHUKO15111 745 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SLC26A4O43511 780 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 FLOT1O75955 427 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 TMEM253P0C7T8 217 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 NMT1P30419 496 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SOX5P35711 763 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 PEX5P50542 639 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 APOBEC3HQ6NTF7 200 aaKnown RBP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 RINT1Q6NUQ1 792 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 C1orf186Q6ZWK4 172 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 BHMT2Q9H2M3 363 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 SEMA4AQ9H3S1 761 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 BCCIPQ9P287 314 aaKnown RBP eCLIP8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 AGAP1Q9UPQ3 857 aa8.08□□□□□ -1.12
PPARGC1A-217ENST00000613098 TMCO5BA8MYB1 307 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 DNAJC8O75937 253 aaPredicted RBP8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 OAS1P00973 400 aaKnown RBP8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 CHN1P15882 459 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 PLCG2P16885 1265 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 DRAP1Q14919 205 aaPredicted RBP8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 NFIL3Q16649 462 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 PRR16Q569H4 304 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 C1orf220Q5T0J3 134 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 FAM182BQ5T319 152 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 RUFY4Q6ZNE9 571 aa8.07□□□□□ -1.12
PPARGC1A-217ENST00000613098 MICALCLQ6ZW33 695 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms