RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 DAAM2Q86T65 1068 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 SYCE1Q8N0S2 351 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 WHAMMQ8TF30 809 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 TEKT3Q9BXF9 490 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 STK33Q9BYT3 514 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 DNAJC12Q9UKB3 198 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 NENFQ9UMX5 172 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 UBE4BO95155 1302 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 A0A0A6YYK5 440 aaPredicted RBP18.75■□□□□ 0.59
NEK3-206ENST00000611833 PGRMC1O00264 195 aaKnown RBP18.75■□□□□ 0.59
NEK3-206ENST00000611833 MUTP22033 750 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 IRAK1P51617 712 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 TTMPQ5BVD1 217 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 FAM160B2Q86V87 743 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 TSPYL1Q9H0U9 437 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 AGPAT3Q9NRZ7 376 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 KCND2Q9NZV8 630 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 ODF2LQ9ULJ1 636 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 ATP8B3O60423 1300 aa18.75■□□□□ 0.59
NEK3-206ENST00000611833 ARHGEF35A5YM69 484 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 F8VZ95 297 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 IPO5O00410 1097 aaKnown RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 CAP2P40123 477 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 SETQ01105 290 aaPredicted RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 HLTFQ14527 1009 aaKnown RBP eCLIP18.74■□□□□ 0.59
NEK3-206ENST00000611833 DRAP1Q14919 205 aaPredicted RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 TRADDQ15628 312 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 DNAJC21Q5F1R6 531 aaKnown RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 METTL13Q8N6R0 699 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 SCFD2Q8WU76 684 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 LXNQ9BS40 222 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 AP1M1Q9BXS5 423 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 ZNF277Q9NRM2 450 aaPredicted RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 TBC1D12O60347 775 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 KRT14P02533 472 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 LMNB1P20700 586 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 GALCP54803 685 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 GLYCTKQ8IVS8 523 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 IQCKQ8N0W5 287 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 MREGQ8N565 214 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 BANK1Q8NDB2 785 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.74■□□□□ 0.593e-10■■■■□ 19.3
NEK3-206ENST00000611833 TAF1DQ9H5J8 278 aaPredicted RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 SUCLA2Q9P2R7 463 aaPredicted RBP18.74■□□□□ 0.59
NEK3-206ENST00000611833 FEM1BQ9UK73 627 aa18.74■□□□□ 0.59
NEK3-206ENST00000611833 TRIM49P0CI25 452 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 TRIM49CP0CI26 452 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 PLS1Q14651 629 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 CBWD6Q4V339 395 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 CBWD3Q5JTY5 395 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 CBWD5Q5RIA9 395 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
NEK3-206ENST00000611833 SLFN11Q7Z7L1 901 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 C10orf67Q8IYJ2 551 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 LNX1Q8TBB1 728 aaPredicted RBP18.73■□□□□ 0.59
NEK3-206ENST00000611833 AGBL1Q96MI9 1066 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 NOC2LQ9Y3T9 749 aaKnown RBP18.73■□□□□ 0.59
NEK3-206ENST00000611833 DDX39AO00148 427 aaKnown RBP18.73■□□□□ 0.59
NEK3-206ENST00000611833 KRIT1O00522 736 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 EXOC3O60645 756 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 CLSTN1O94985 981 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 CCDC172P0C7W6 258 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 ITGB5P18084 799 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 NPEPPSP55786 919 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 GNGT1P63211 74 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 PPP2R5AQ15172 486 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 KCTD16Q68DU8 428 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 CALR3Q96L12 384 aaKnown RBP18.73■□□□□ 0.59
NEK3-206ENST00000611833 MXRA8Q9BRK3 442 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 INTS2Q9H0H0 1204 aaKnown RBP18.73■□□□□ 0.59
NEK3-206ENST00000611833 ISCUQ9H1K1 167 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 DMAC2Q9NW81 257 aa18.73■□□□□ 0.59
NEK3-206ENST00000611833 MYH11P35749 1972 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 HIP1RO75146 1068 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 MYL7Q01449 175 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 SLC30A5Q8TAD4 765 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 COL20A1Q9P218 1284 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 FEZ2Q9UHY8 353 aaPredicted RBP18.72■□□□□ 0.59
NEK3-206ENST00000611833 AMFRQ9UKV5 643 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 ZNF536O15090 1300 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 ZNF233A6NK53 670 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 TRIM66O15016 1216 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 GUCY2CP25092 1073 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 HSD17B4P51659 736 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 MAPK7Q13164 816 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 FKBP1CQ5VVH2 108 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 NT5DC3Q86UY8 548 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 FMNL3Q8IVF7 1028 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 DAW1Q8N136 415 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 TTLL6Q8N841 843 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 OLIG1Q8TAK6 271 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.72■□□□□ 0.59
NEK3-206ENST00000611833 PSMD1Q99460 953 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 DEFB129Q9H1M3 183 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 PKD2L1Q9P0L9 805 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 STXBP5LQ9Y2K9 1186 aa18.72■□□□□ 0.59
NEK3-206ENST00000611833 CCDC188H7C350 402 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms