RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 CARSP49589 748 aaKnown RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 EARS2Q5JPH6 523 aaKnown RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 RFX6Q8HWS3 928 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 CDHR1Q96JP9 859 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 KRT14P02533 472 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 CA4P22748 312 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 IRAK1P51617 712 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 PFASO15067 1338 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 MDH1P40925 334 aaKnown RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 DYNLT1P63172 113 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 TXLNGQ9NUQ3 528 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 DUSP10Q9Y6W6 482 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 FAM237AA0A1B0GTK4 181 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ABCD1P33897 745 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 GALCP54803 685 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 NAB2Q15742 525 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 PAPD7Q5XG87 772 aaKnown RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 MAP7D3Q8IWC1 876 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 RNF34Q969K3 372 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 REEP2Q9BRK0 252 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 VCX3BQ9H321 246 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 H3BQF6 201 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 SLC9A1P19634 815 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 GCKP35557 465 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 DHX34Q14147 1143 aaKnown RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 LXNQ9BS40 222 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 NUP85Q9BW27 656 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ANKZF1Q9H8Y5 726 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 HESX1Q9UBX0 185 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 MAD1L1Q9Y6D9 718 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 FRMD3A2A2Y4 597 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 SLC16A4O15374 487 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH1-212ENST00000611625 MMP10P09238 476 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 MSH2P43246 934 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 HVCN1Q96D96 273 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 SUGT1Q9Y2Z0 365 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 SCINQ9Y6U3 715 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 EMSYQ7Z589 1322 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 LRRIQ3A6PVS8 624 aaPredicted RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 MEFVO15553 781 aaPredicted RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 RAD51CO43502 376 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 LUC7L3O95232 432 aaKnown RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 HERVK_113P62684 666 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 MIS18BP1Q6P0N0 1132 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 CCDC137Q6PK04 289 aaKnown RBP13.35□□□□□ -0.27
CDH1-212ENST00000611625 CFAP61Q8NHU2 1237 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 PPP4R1Q8TF05 950 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 CHMP6Q96FZ7 201 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 EPN3Q9H201 632 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ABCB11O95342 1321 aa13.35□□□□□ -0.27
CDH1-212ENST00000611625 ARHGAP42A6NI28 874 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 IPO5O00410 1097 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 TTI1O43156 1089 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 CCND2P30279 289 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 MTMR1Q13613 665 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 TBC1D16Q8TBP0 767 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 A0A087X0B3 334 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 ASNSP08243 561 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 TXNDC9O14530 226 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 MCF2LO15068 1137 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 CD58P19256 250 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 JAK3P52333 1124 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 HDLBPQ00341 1268 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 GRB10Q13322 594 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 JMJD4Q9H9V9 463 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
CDH1-212ENST00000611625 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 PSAPP07602 524 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 PPP4CP60510 307 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
CDH1-212ENST00000611625 CCT8L2Q96SF2 557 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms