RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 EFR3BQ9Y2G0 817 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 STK36Q9NRP7 1315 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 O00370 1275 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 CAPN9O14815 690 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 ZBTB43O43298 467 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 RAD21O60216 631 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 KRT36O76013 467 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 RPN1P04843 607 aaKnown RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 KCNMA1Q12791 1236 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 HS2ST1Q7LGA3 356 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 AGGF1Q8N302 714 aaeCLIP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 NAT14Q8WUY8 206 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 FMO2Q99518 471 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 LRMDAQ9H2I8 198 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 LRRC53A6NM62 1247 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 OR6B1O95007 311 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 CREB1P16220 341 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 KLRC1P26715 233 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 SLC29A2Q14542 456 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 VPS72Q15906 364 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 NTRK3Q16288 839 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 MEI1Q5TIA1 1274 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 DENND2CQ68D51 928 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 LRRC74BQ6ZQY2 392 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 STKLD1Q8NE28 680 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 DDX18Q9NVP1 670 aaKnown RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 SUCLA2Q9P2R7 463 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 TMEM59LQ9UK28 342 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
CTCFL-218ENST00000608440 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-218ENST00000608440 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CCDC169A6NNP5 214 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 FOXO6A8MYZ6 492 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 KRIT1O00522 736 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CBX6O95503 412 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 SKIV2L2P42285 1042 aaKnown RBP13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CLCN2P51788 898 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CYB5R4Q7L1T6 521 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 KBTBD2Q8IY47 623 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CSGALNACT2Q8N6G5 542 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 EIF1ADQ8N9N8 165 aaKnown RBP13.54□□□□□ -0.24
CTCFL-218ENST00000608440 ARHGEF2Q92974 986 aaKnown RBP13.54□□□□□ -0.24
CTCFL-218ENST00000608440 PGM2Q96G03 612 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 MIS12Q9H081 205 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
CTCFL-218ENST00000608440 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 UBAP1Q9NZ09 502 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 HEY1Q9Y5J3 304 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 ITGB4P16144 1822 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-218ENST00000608440 ZNF213O14771 459 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 ERFP50548 548 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 GSTM4Q03013 218 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 KPNB1Q14974 876 aaKnown RBP13.54□□□□□ -0.24
CTCFL-218ENST00000608440 WDR72Q3MJ13 1102 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 WASHC2DQ5SRD0 308 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 GRAMD4Q6IC98 578 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 C14orf80Q86SX3 495 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 PPFIBP2Q8ND30 876 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 PRKAG3Q9UGI9 489 aa13.54□□□□□ -0.24
CTCFL-218ENST00000608440 WNT7AO00755 349 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 P4HA2O15460 535 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 OCRLQ01968 901 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 ZNF174Q15697 407 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 MYD88Q99836 296 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 FOXP2O15409 715 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 RNF113AO15541 343 aaKnown RBP13.53□□□□□ -0.24
CTCFL-218ENST00000608440 PJA2O43164 708 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 MAP3K7O43318 606 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 OPHN1O60890 802 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 GH1P01241 217 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 NFKBIAP25963 317 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 PMS2P54278 862 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 MTTPP55157 894 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 SULT2A1Q06520 285 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 RPS6KA1Q15418 735 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 VWA3BQ502W6 1294 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 ZNF362Q5T0B9 420 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-218ENST00000608440 SYDE2Q5VT97 1194 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 CGB2Q6NT52 195 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 C16orf87Q6PH81 154 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 DAAM2Q86T65 1068 aa13.53□□□□□ -0.24
CTCFL-218ENST00000608440 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms