RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 DGAT1O75907 488 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 DGKIO75912 1065 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 CD2BP2O95400 341 aaKnown RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 TECP42680 631 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 NPEPPSP55786 919 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 PTPROQ16827 1216 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 FAM228AQ86W67 206 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 RHPN2Q8IUC4 686 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 CMTR2Q8IYT2 770 aaKnown RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 RSPH1Q8WYR4 309 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 MTRQ99707 1265 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 TMEM60Q9H2L4 133 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 ELAC1Q9H777 363 aaKnown RBP12.89□□□□□ -0.35
CCDC12-209ENST00000604164 CERS4Q9HA82 394 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 WDR81Q562E7 1941 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 SIP14410 1827 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 EVPLQ92817 2033 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 POTEMA6NI47 508 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 WNT7AO00755 349 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 RB1P06400 928 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 SKIP12755 728 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 RPA1P27694 616 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 PRPHP41219 470 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC12-209ENST00000604164 TFDP1Q14186 410 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 ADGRE1Q14246 886 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 PDIA5Q14554 519 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 EMC2Q15006 297 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC12-209ENST00000604164 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-209ENST00000604164 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-209ENST00000604164 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-209ENST00000604164 ATP6V0A4Q9HBG4 840 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-209ENST00000604164 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
CCDC12-209ENST00000604164 C9IYK1 514 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 FAM189BP81408 668 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
CCDC12-209ENST00000604164 PTGDRQ13258 359 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 GRB10Q13322 594 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 CUL4AQ13619 759 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 EPC2Q52LR7 807 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 NAALADL2Q58DX5 795 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC12-209ENST00000604164 LINC01599Q8WXQ3 324 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 CLP1Q92989 425 aaKnown RBP12.87□□□□□ -0.35
CCDC12-209ENST00000604164 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 PLVAPQ9BX97 442 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 AAASQ9NRG9 546 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
CCDC12-209ENST00000604164 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
CCDC12-209ENST00000604164 TTC3P53804 2025 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 A0A087WZ62 844 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 EPOPA6NHQ4 379 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 C5orf67F2Z3F1 127 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 H3BNC9 293 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 MGEA5O60502 916 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 EOMESO95936 686 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 BMP15O95972 392 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 CTNNB1P35222 781 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 BMPR1AP36894 532 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 PHKA2P46019 1235 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 RARRES1P49788 294 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 POU5F1BQ06416 359 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 DRP2Q13474 957 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 DSC3Q14574 896 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 CATSPER3Q86XQ3 398 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 MCPH1Q8NEM0 835 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 GDPD5Q8WTR4 605 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
CCDC12-209ENST00000604164 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 INTS4Q96HW7 963 aaKnown RBP12.86□□□□□ -0.35
CCDC12-209ENST00000604164 FDXACB1Q9BRP7 624 aaPredicted RBP12.86□□□□□ -0.35
CCDC12-209ENST00000604164 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 RC3H2Q9HBD1 1191 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms