RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 OSBPL3Q9H4L5 887 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 EHMT1Q9H9B1 1298 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 KCTD5Q9NXV2 234 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 STOML1Q9UBI4 398 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 PLAAQ9Y263 795 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 ADGRG1Q9Y653 693 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 GTPBP10A4D1E9 387 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 SYCE1LA8MT33 242 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 PEX11AO75192 247 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 CRYZL1O95825 349 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RARAP10276 462 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 STAT3P40763 770 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 CBX5P45973 191 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RPS3AP61247 264 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 KCNJ2P63252 427 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 CDK18Q07002 472 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF569Q5MCW4 686 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 SPECC1LQ69YQ0 1117 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 ANO5Q75V66 913 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 PIGWQ7Z7B1 504 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 ST13P4Q8IZP2 240 aaPredicted RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 ABTB2Q8N961 1025 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 BBOF1Q8ND07 529 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 COX4I2Q96KJ9 171 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 MTMR9Q96QG7 549 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 LPIN3Q9BQK8 851 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 CNOT10Q9H9A5 744 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 SCPEP1Q9HB40 452 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 SLC38A10Q9HBR0 1119 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RIMKLBQ9ULI2 386 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RRP7AQ9Y3A4 280 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 PIK3C2BO00750 1634 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 ITSN1Q15811 1721 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 OR5K4A6NMS3 321 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 YEATS4O95619 227 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 COL6A1P12109 1028 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 FECHP22830 423 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 UBASH3AP57075 661 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RCN2Q14257 317 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 GNA13Q14344 377 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 NCAPHQ15003 741 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 CYTH1Q15438 398 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 WASHC4Q2M389 1173 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 AKAP4Q5JQC9 854 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 CYP4A22Q5TCH4 519 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 LLGL2Q6P1M3 1020 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 PDXDC1Q6P996 788 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RFPL4BQ6ZWI9 263 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 LZTR1Q8N653 840 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 ANKRD53Q8N9V6 530 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 RPGRQ92834 1020 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 PPANQ9NQ55 473 aaKnown RBP9.52□□□□□ -0.89
COMMD3-215ENST00000602574 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 SBNO1A3KN83 1393 aa9.52□□□□□ -0.89
COMMD3-215ENST00000602574 TULP4Q9NRJ4 1543 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 KNDC1Q76NI1 1749 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 MUSKO15146 869 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PLSCR1O15162 318 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ADCY3O60266 1144 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 GSSP48637 474 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 POLA2Q14181 598 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 KARSQ15046 597 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SGO2Q562F6 1265 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 AGBL2Q5U5Z8 902 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SPOPLQ6IQ16 392 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 NEK5Q6P3R8 708 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CPLX4Q7Z7G2 160 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ARHGAP24Q8N264 748 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SLC35F6Q8N357 371 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SH2D3CQ8N5H7 860 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 TC2NQ8N9U0 490 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CAGE1Q8TC20 777 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CALML6Q8TD86 181 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PYROXD1Q8WU10 500 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PRCCQ92733 491 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 KLHL29Q96CT2 875 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 RMDN1Q96DB5 314 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 DGCR14Q96DF8 476 aaKnown RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CHMP6Q96FZ7 201 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 CEP19Q96LK0 163 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 FBXL18Q96ME1 805 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 ESYT1Q9BSJ8 1104 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 TRPV6Q9H1D0 765 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 GIN1Q9NXP7 522 aa9.51□□□□□ -0.89
COMMD3-215ENST00000602574 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-215ENST00000602574 USH1CQ9Y6N9 552 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms