RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 POTEGQ6S5H5 508 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
USE1-210ENST00000601662 RAD54LQ92698 747 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 FAM161BQ96MY7 647 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
USE1-210ENST00000601662 DBR1Q9UK59 544 aaKnown RBP16.07■□□□□ 0.16
USE1-210ENST00000601662 IGSF9BQ9UPX0 1349 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 PARNO95453 639 aaKnown RBP16.06■□□□□ 0.16
USE1-210ENST00000601662 KLRC1P26715 233 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 YWHABP31946 246 aaKnown RBP16.06■□□□□ 0.16
USE1-210ENST00000601662 SMAD3P84022 425 aaKnown RBP16.06■□□□□ 0.16
USE1-210ENST00000601662 UGCGQ16739 394 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 NAALADL2Q58DX5 795 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 ZNF484Q5JVG2 852 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 CCDC183Q5T5S1 534 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 TAF2Q6P1X5 1199 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 RSPH3Q86UC2 560 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 DEFB123Q8N688 67 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 SYT2Q8N9I0 419 aaPredicted RBP16.06■□□□□ 0.16
USE1-210ENST00000601662 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 NUP62CLQ9H1M0 184 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 TNMDQ9H2S6 317 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 CLSTN2Q9H4D0 955 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 BLOC1S4Q9NUP1 217 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 PPME1Q9Y570 386 aa16.06■□□□□ 0.16
USE1-210ENST00000601662 MBLAC1A4D2B0 266 aaPredicted RBP16.05■□□□□ 0.16
USE1-210ENST00000601662 E9PMD0 336 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 PLA2G4BP0C869 781 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 TMEM62Q0P6H9 643 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 TCTN1Q2MV58 587 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 MTHFD1LQ6UB35 978 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 DBF4BQ8NFT6 615 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
USE1-210ENST00000601662 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
USE1-210ENST00000601662 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
USE1-210ENST00000601662 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 KCND2Q9NZV8 630 aa16.05■□□□□ 0.16
USE1-210ENST00000601662 MYH9P35579 1960 aaKnown RBP16.05■□□□□ 0.16
USE1-210ENST00000601662 SZT2Q5T011 3432 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 ARHGEF35A5YM69 484 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 ZNF862O60290 1169 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 CHRNA1P02708 482 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 CXCL10P02778 98 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 OATP04181 439 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 PBX2P40425 430 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 RABGGTBP53611 331 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 PRKCEQ02156 737 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 MCM6Q14566 821 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
USE1-210ENST00000601662 CNKSR3Q6P9H4 555 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 KCNK18Q7Z418 384 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 WRAP73Q9P2S5 460 aaPredicted RBP16.04■□□□□ 0.16
USE1-210ENST00000601662 PCDHA2Q9Y5H9 948 aa16.04■□□□□ 0.16
USE1-210ENST00000601662 LAMA2P24043 3122 aaKnown RBP16.04■□□□□ 0.16
USE1-210ENST00000601662 TANC1Q9C0D5 1861 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 GTPBP6O43824 516 aaPredicted RBP16.03■□□□□ 0.16
USE1-210ENST00000601662 CAND2O75155 1236 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 STBD1O95210 358 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 SMC2O95347 1197 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
USE1-210ENST00000601662 GHRP10912 638 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
USE1-210ENST00000601662 DNAJB2P25686 324 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 AFMP43652 599 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 KCNJ6P48051 423 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 SLC12A3P55017 1021 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 MRPS6P82932 125 aaKnown RBP16.03■□□□□ 0.16
USE1-210ENST00000601662 IKBKEQ14164 716 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 POSTNQ15063 836 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 FAM26DQ5JW98 314 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 METTL13Q8N6R0 699 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 SH2D3AQ9BRG2 576 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 MSRAQ9UJ68 235 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 GINS2Q9Y248 185 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 CDY2AQ9Y6F7 541 aa16.03■□□□□ 0.16
USE1-210ENST00000601662 COL1A2P08123 1366 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 SMIM35A0A1B0GVV1 85 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 TMEM150BA6NC51 233 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 ZBTB42B2RXF5 422 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 M0QZ92 97 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 RARRES1P49788 294 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 DHX8Q14562 1220 aaKnown RBP16.02■□□□□ 0.16
USE1-210ENST00000601662 CAMK4Q16566 473 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 IER5Q5VY09 327 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 GPR153Q6NV75 609 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 ANO5Q75V66 913 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 TMCO2Q7Z6W1 182 aaPredicted RBP16.02■□□□□ 0.16
USE1-210ENST00000601662 RPAINQ86UA6 219 aa16.02■□□□□ 0.16
USE1-210ENST00000601662 SEPT8Q92599 483 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms