RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ATAT1Q5SQI0 421 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 FAM160B1Q5W0V3 765 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 WWC2Q6AWC2 1192 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 SWSAP1Q6NVH7 229 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 TRMT1LQ7Z2T5 733 aaKnown RBP18.23■□□□□ 0.51
SSBP4-211ENST00000601614 ZNF598Q86UK7 904 aaKnown RBP18.23■□□□□ 0.51
SSBP4-211ENST00000601614 ABI1Q8IZP0 508 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 METTL13Q8N6R0 699 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 DTWD2Q8NBA8 298 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 RNF169Q8NCN4 708 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 HELQQ8TDG4 1101 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 SLC22A17Q8WUG5 538 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
SSBP4-211ENST00000601614 ANO3Q9BYT9 981 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 ADAMTS10Q9H324 1103 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
SSBP4-211ENST00000601614 CYP26B1Q9NR63 512 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 NCOR2Q9Y618 2525 aa18.23■□□□□ 0.51
SSBP4-211ENST00000601614 DOCK8Q8NF50 2099 aa18.22■□□□□ 0.51
SSBP4-211ENST00000601614 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-211ENST00000601614 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-211ENST00000601614 BCAR1P56945 870 aa18.22■□□□□ 0.51
SSBP4-211ENST00000601614 NLRP11P59045 1033 aaKnown RBP18.22■□□□□ 0.51
SSBP4-211ENST00000601614 TMC5Q6UXY8 1006 aa18.22■□□□□ 0.51
SSBP4-211ENST00000601614 TMTC3Q6ZXV5 915 aa18.22■□□□□ 0.51
SSBP4-211ENST00000601614 VPS52Q8N1B4 723 aa18.22■□□□□ 0.51
SSBP4-211ENST00000601614 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
SSBP4-211ENST00000601614 BCL7CQ8WUZ0 217 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-211ENST00000601614 FAM86B1E9PN63 330 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 PRC1O43663 620 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 FAM86B2P0C5J1 330 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 FGFR4P22455 802 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 CHMLP26374 656 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 DZANK1Q9NVP4 752 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 DUSP12Q9UNI6 340 aa18.21■□□□□ 0.51
SSBP4-211ENST00000601614 NARSO43776 548 aaKnown RBP18.2■□□□□ 0.5
SSBP4-211ENST00000601614 ZSCAN20P17040 1043 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-211ENST00000601614 TDGQ13569 410 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 CASC1Q6TDU7 716 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 NFXL1Q6ZNB6 911 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 SIX5Q8N196 739 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 LRRC71Q8N4P6 559 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-211ENST00000601614 TMEM169Q96HH4 297 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 VN1R3Q9BXE9 311 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 KCNK12Q9HB15 430 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 RIC8AQ9NPQ8 531 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 MAFBQ9Y5Q3 323 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-211ENST00000601614 IRAK3Q9Y616 596 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 CNTNAP5Q8WYK1 1306 aa18.2■□□□□ 0.5
SSBP4-211ENST00000601614 IGLV3-22A0A075B6J6 115 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 CCDC69A6NI79 296 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 CTSAP10619 480 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 EIF4BP23588 611 aaKnown RBP18.19■□□□□ 0.5
SSBP4-211ENST00000601614 SREBF1P36956 1147 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 MIS18BP1Q6P0N0 1132 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 GPR149Q86SP6 731 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 RTP3Q9BQQ7 232 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 AKT3Q9Y243 479 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 RBM8AQ9Y5S9 174 aaKnown RBP18.19■□□□□ 0.5
SSBP4-211ENST00000601614 R4GN57 208 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 CACNA1IQ9P0X4 2223 aa18.19■□□□□ 0.5
SSBP4-211ENST00000601614 KRBA1A5PL33 1030 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 SGSM2O43147 1006 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 N4BP1O75113 896 aaKnown RBP18.18■□□□□ 0.5
SSBP4-211ENST00000601614 ZC3H11AO75152 810 aaKnown RBP eCLIP18.18■□□□□ 0.5
SSBP4-211ENST00000601614 ALDH7A1P49419 539 aaKnown RBP18.18■□□□□ 0.5
SSBP4-211ENST00000601614 EFCAB12Q6NXP0 572 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 KIAA2013Q8IYS2 634 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 FANCBQ8NB91 859 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 MAP4K1Q92918 833 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 MTA3Q9BTC8 594 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 FBXL21Q9UKT6 434 aa18.18■□□□□ 0.5
SSBP4-211ENST00000601614 MEIS3P2A8K0S8 358 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 ADAMTS3O15072 1205 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 B4GALT3O60512 393 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 CSDE1O75534 798 aaKnown RBP18.17■□□□□ 0.5
SSBP4-211ENST00000601614 FOSP01100 380 aaPredicted RBP18.17■□□□□ 0.5
SSBP4-211ENST00000601614 LMNAP02545 664 aaKnown RBP18.17■□□□□ 0.5
SSBP4-211ENST00000601614 CLK2P49760 499 aaKnown RBP18.17■□□□□ 0.5
SSBP4-211ENST00000601614 NAPAP54920 295 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 NIPA1Q7RTP0 329 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 DDX53Q86TM3 631 aaKnown RBP18.17■□□□□ 0.5
SSBP4-211ENST00000601614 CABP7Q86V35 215 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 KCNG4Q8TDN1 519 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 ACSF2Q96CM8 615 aaPredicted RBP18.17■□□□□ 0.5
SSBP4-211ENST00000601614 IGSF21Q96ID5 467 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 NRDE2Q9H7Z3 1164 aa18.17■□□□□ 0.5
SSBP4-211ENST00000601614 TPRP12270 2363 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms